Rhinichthys klamathensis goyatoka (western speckled dace): 130101218
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Entry
130101218 CDS
T09701
Symbol
desmb
Name
(RefSeq) desmin b
KO
K07610
desmin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04519
Cadherin signaling
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130101218 (desmb)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130101218 (desmb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130101218 (desmb)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130101218 (desmb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF8429
ANG-1
DUF7491
TolA_bind_tri
COLEC12
CCDC89
KIF21A_4th
CCDC92
SPC25_N
Motif
Other DBs
NCBI-GeneID:
130101218
NCBI-ProteinID:
XP_056122805
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSCAHSVSVLSGGCLYSSGLSFLCSNMSHSYASSSASSYRRMFGGPGYLTPPMSRSMFGR
ASTGGSGNSRVSSRVYELSKSSTSSPGFSNYRASSYSMPNLSAGYTRSYGGMGETLDFSL
ADALNQEFLHTRTNEKAELQHLNDRFASYIEKVRMLEQQNQVLVVEVERLRGREPTRIAD
LYEDEMRELRREIEVVTNHRSRVEVERDNLADDVQKLKIRLQEEIALREEADNTLSAFRA
DVDAATLARLDLERRIETLQEEIAFLKKIHEEEIRELQAQMQETQVQIQMDMSKPDLTAA
LRDIRAQYEGIAAKNIAEAEDWYKSKVSDLNQAVSKNNEALKQSKLESMEFRHQIQSYTC
EIDSLKGTNESLMRQMRDMEDRHGREAGSFQDTIARLEAEISNMKDEMARHLREYQDLLN
IKMALDVEIATYRKLLEGEESRIVMPMQAYSTISFRETSPEHQQRASEMHSKKTVLIKTI
ETRDGEVVSESTQHQQDIM
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcgctcattctgtctctgtcctctccggaggctgtctgtattcatctggtctg
tccttcttgtgctccaacatgagccactcttatgcctcctcctcagcctcttcataccgt
cgcatgttcggcggtcccggctacctgacgccaccaatgtcccgttctatgtttggccga
gcctccaccggggggtccggcaactctagggtcagctccagagtctacgagctctccaag
tcctccacttcttctcctggattctccaattatcgagcctcctcctacagtatgcccaac
ttatctgcgggctatacccgctcctatggcgggatgggtgagacgctggacttcagcctg
gcagacgcgctcaaccaggagttcctccacacacgcactaatgagaaggctgagcttcag
cacctgaacgaccgatttgccagctacatcgagaaggttcgcatgctggagcagcagaat
caggtgctggtggttgaggtggagcgtttgagggggagggagcccacgcgcatcgccgac
ctgtacgaggatgagatgagggagctgaggagagagatcgaagtggtgaccaatcacaga
tcacgtgtggaggtggagcgggacaacttggcagatgacgtgcagaaactgaaaatcagg
cttcaggaggagattgcactgagggaggaggcagataatactctgtccgctttcagagca
gacgtggatgctgccacgttggcccgcctggatctggaaagacgtatagagactctccag
gaagagatcgccttcctcaagaagatccacgaggaggaaatccgtgagttgcaagcccag
atgcaagagacccaagtccagatccagatggacatgtccaaaccagacctgactgctgcc
ctgagggacatccgtgctcagtatgagggcattgctgcaaagaacatcgcagaagccgag
gactggtacaagtcaaaggtgtcagaccttaaccaggcagtgagcaagaacaacgaggct
ctcaaacaatccaagctggagagcatggagttcagacaccagatccagtcctacacctgt
gagatcgattccctcaagggcactaacgagtctctcatgaggcagatgagagatatggag
gatcgccacggtcgtgaggccggctctttccaggacaccatcgccaggctggaggcggag
atctctaacatgaaggatgagatggcacgtcacctgagagaatatcaggacctgctcaac
attaagatggccctggatgtggagatcgccacctataggaagctgctggaaggagaggag
agcaggattgtgatgcccatgcaggcgtattccactataagctttagagagacgagtcca
gagcatcaacagagagcatctgaaatgcactcaaagaaaacggtcctgatcaagaccatt
gagacacgtgacggagaggtggtgagtgaatctacacagcaccagcaggacatcatgtaa
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