Rhinichthys klamathensis goyatoka (western speckled dace): 130101245
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Entry
130101245 CDS
T09701
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130101245 (sox21a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130101245 (sox21a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130101245
NCBI-ProteinID:
XP_056122855
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All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKTLVKKDRYHFNVTYNLGDSDPLKSARLPGDALADSL
SAEKTSVAAATRVFFSHHHLSANPYQFLDLNSKITELPPAPFPHYSLLGYPGGVSAFPGM
GVLAGAPHAHPSPGNPGHMVPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEHYLTYAATI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccacgttaagcgtcctatgaacgcttttatggtgtggtcgagg
gctcagagacgcaaaatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggcgaatggaagctcttgtcagactctgaaaaaagaccttttatcgacgag
gccaaacgcctgagagccgttcacatgaaagaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaccttggtcaaaaaagataggtatcattttaatgtgacgtataatctg
ggtgacagtgacccgttgaaaagtgcgcggttacccggtgacgcgctcgcggactcgctg
agcgcggaaaaaacatccgtcgctgccgctactcgggtgtttttcagtcaccaccacctg
tccgccaacccctatcagtttcttgacctgaattccaaaattacggaattaccccctgct
cctttcccacattactctttgctcgggtatcccggtggagtctccgcgttccccggtatg
ggggttctggccggtgcgccacacgctcacccgtctccggggaacccgggccacatggtg
ccctataactgcctgggctggccgggttctggacctgctgttccttcttcttacgtgctt
ttaccaggaatgaccaaagctcagcacgaacattacctgacatacgccgcgacgatatga
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