Rhinichthys klamathensis goyatoka (western speckled dace): 130101394
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Entry
130101394 CDS
T09701
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130101394 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130101394 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130101394 (chrna1)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130101394 (chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130101394
NCBI-ProteinID:
XP_056123090
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MNNFILILPFLPLLFEPALCSEDETRLVKTLFTGYNKVVRPVSHFKDPVVVTVGLQLIQL
ISVDEVNQIVSSNVRLKQQWKDVNLQWNPDDYGGIRKIRIPSTDIWKPDLVLYNNADGDF
AIVHETKVMLEHTGMITWTPPAIFKSYCEIVVLHFPFDLQNCSMKLGTWTYDGNLVIINP
DSDRPDLSNFMESGEWVMKDYRNWKHWVYYSCCPDTPYLDITYHFLLLRLPLYFIVNVII
PCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMIFVIASIIITVIVINTHHRSPSTHTMPAWVRKIFIDTIPNLMFFSTMKRPSQERQEKH
IFPADFDISDISGKPMPASVTYHSPITKNPDVRSAIEGVKYIADTMKSDEESNNAAEEWK
FVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELSML
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaataactttatactgattttgccatttttgcctcttctatttgaaccagcactgtgc
tcggaagatgagacaagattagtaaagactctgtttaccggatataacaaggttgttcgt
cctgtcagccattttaaggatccagtagtggttactgttggactacaactcattcagctt
atcagcgtggatgaagttaatcagattgtctccagtaatgtacggctaaagcagcaatgg
aaggatgtgaatctgcagtggaatcctgatgactacggtggcatcaggaagatcagaatt
ccctccactgacatctggaaacccgatttagtgctttataacaatgctgatggagacttt
gccattgtccatgagacaaaggtcatgttggagcacacgggtatgataacatggactcca
ccagcaatctttaagagctactgtgagatcgtggtccttcactttcccttcgacctgcag
aactgcagcatgaaacttggaacgtggacctatgatggcaaccttgtcatcatcaaccca
gacagcgacagaccagacctcagtaatttcatggagagcggggagtgggtgatgaaggat
tacaggaactggaaacactgggtgtattattcttgctgtccagatacaccctacctcgac
atcacttatcacttcctcctgctccgcctcccgctctacttcatcgtgaacgtcatcatc
ccctgcatgctgttctccttcctcactgggcttgtgttctacctgcccacagactctggt
gagaagatgaccctcagcatctctgtcctgctttctctgactgtgttcttgctggtgatt
gttgagttgatcccctccacgtccagcgccgtcccactcatcggcaaatacatgctcttc
accatgatctttgtcattgcttctatcatcatcactgtgattgtcatcaacacacaccac
cgctcccccagcacacacaccatgcctgcctgggtccgcaagatcttcatagacaccatt
ccaaacctgatgtttttctccaccatgaagcgaccatcccaggaacgacaggaaaagcat
atctttcctgccgattttgacatctctgacatctcagggaaacccatgccagcctctgtc
acttaccactctcccataaccaaaaatcctgatgtacgtagtgccatcgagggtgttaaa
tacatcgcagacaccatgaaaagcgacgaggagtccaacaacgccgcagaggaatggaag
tttgtcgctatggtcctggatcacattcttctctgtgtgttcatggcggtgtgtattatt
ggcactttaggggtgtttgccggacgcctgattgagctcagcatgctgtga
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