Rhinichthys klamathensis goyatoka (western speckled dace): 130101465
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Entry
130101465 CDS
T09701
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130101465 (wdhd1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
130101465 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
HMG_WDHD1
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_Aladin
EIF3I
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
eIF2A
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
HMG_box
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR19_2nd
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_ACSF4
DUF6476
Motif
Other DBs
NCBI-GeneID:
130101465
NCBI-ProteinID:
XP_056123194
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDEGKCIVTCGSDGDVRIWESLDDDDPKSINVGEKVYSV
ALKNGKLVTAVSNNTVQIHTFPEGDPDGILTRFTTNANHVTFNASGSRVAAGSSDFLVKI
VEVADSSQQKTLRGHDAPVLSVALDPSDEFLASSSCDGSVTVWSIESQTQVAQWKVLQKS
SDVSNAKSLCRLAWQPRSGKLLAVPVDLTIQLYDKNTWTHVSTLSDELITQVFNVVVWSP
CGKFLAAGTVGGNLLIWDVEAKLCIERQKHEKGFTVCGMAWHPSGGRIAYTDTEGCLGLL
EDVRSSSSTIQNTKATAAKETNDYDDLFDEEDDRMLDEGTSDSRSPVKKPIMDDDDDDDD
LMPATGRPRNRGSFLDDDDNSQDPGFVKLDGLPEEDGSSAVLPAVGPAVSRPIYEGPMPS
QPQRAFQPGSTPVHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAIHHAMHLTNSLGH
TMADLSQEAVLLACEGTDELASKIQCLHFSCWDTHKDWMVDLPKGEDVCALCLGQGWAAV
ATSALMVRLFSIGGVQKEIFSLPGAVVCMAGHGEQLLIVYHRGTGFDGDQALGVQLLQLG
RKRRQVIHGEPLPLSRKSYLAWMGFTAEGTPCCIDSEGVVRMLNRTLGNTWAPVCNTRDT
CKSKSDHCWVVGVHENPQQIRCIPCKGSRFPPTLPRPAVAVLPFNLPYCQTTTEKGQMEE
QYWRSMLFHNHFGFLSSSGYEIDSEGQSQAEKEQQELLMKMFALSCKLEREFRCVELAEL
MTHSVVTLAIRYASRSRRMALAQRLSELALEKANQLQEEEQEDDDEPVYQRHTSREYRGS
NKMSSRQAQVENGCEEEEEQEEYPQEEQMDAEDSTETRKPRLNPFKKGGKSPERPSPKPV
SREGRVNPFKVSGAEKSSSSPAGQPRTTNVLDSMTMSSRKPATLSGTSKQGKAPVLKPLA
PKPKSKTQATLLQMSASKGNRKKQEDSQSEAEKMKPVPAATPPVSAENIENRKPKTGFQL
WLEENRKSILADNPDFEEMDVIKEGMGRFRTLSAEERLNWTERAKGDSDPKKRKREDEAG
QVNEHMDSEEGSAKKKKPLDTSAKLSAFAFNKD
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtgaaaggaagcccatgcgttacggtcactcagaaggccacactgatgtctgc
tttgatgatgaaggaaagtgtatcgtgacttgtgggagtgatggtgatgtccgcatatgg
gaaagtctagatgacgatgatcccaagtctataaatgtcggggagaaggtctattctgta
gccttgaagaatggaaagctagttacagcagtttccaacaacacggttcagattcacact
ttcccagagggagatccagatggcatactcactcgattcaccaccaacgcaaaccacgtc
accttcaacgccagcgggtcaagagtggctgccggctcaagcgacttcctggtgaagata
gtggaggtggcggacagcagtcagcagaagaccctacgtgggcatgacgctcccgtcctc
agtgtggctcttgatccttctgatgagttccttgcttcctccagctgtgatggatcagtc
actgtgtggtctattgagtcacagactcaagtagctcaatggaaagttctccagaagtca
agtgatgttagcaatgccaagtctctctgtagacttgcttggcagccccgttctggaaag
ctgcttgccgtaccagtggacttaaccattcagctgtatgacaaaaacacatggacacat
gttagcacactctctgatgaactcatcacgcaggtttttaatgttgtggtctggtcgccg
tgtgggaagtttctggctgcaggaacagttggcggaaacctgttgatttgggatgtagag
gccaaactgtgtatcgagagacagaaacatgagaaaggcttcactgtgtgtgggatggcg
tggcatccctcagggggccggatcgcttacacggacacagagggctgcctcgggctcctg
gaagacgtgcggtcctcttcctctactatccagaacaccaaggccactgcagctaaagaa
acaaatgactatgatgacctgtttgatgaggaggatgaccggatgctggacgagggcacg
agtgactcgcggtctccggtgaagaaacccatcatggatgacgacgacgatgacgacgac
ctcatgcctgccacgggcagaccgcggaacagagggtcctttttggatgacgatgacaat
tctcaagatccaggctttgtaaaactggatggacttccagaggaggatggcagcagtgct
gttcttcctgcggtgggtcctgcagtgtcccgtcccatatacgagggtcccatgccatca
caaccccaaagggctttccagccgggatctaccccagtgcacctcatgcatcgctttatg
atgtggaactccgtgggcatcgtccgtggctataatgatgatcaggacaacgctattgat
gtggagttccacgatactgcgatccatcatgccatgcatctcaccaactccctgggccac
accatggctgatctatcccaggaggccgtgctgctggcctgtgagggaactgatgagctt
gccagtaagatccagtgtttgcacttctcgtgctgggacactcataaggattggatggtg
gatcttcctaaaggcgaggacgtgtgtgccttgtgtttgggtcagggctgggcggcagtg
gccaccagtgctctgatggtcaggctgttctccatcggtggtgtgcagaaggagatcttc
agcctgccaggagctgtggtctgcatggcaggacatggagagcagctcctcatagtgtat
cacagaggtactgggtttgatggagaccaggcccttggcgtacagctgcttcagctcggg
cggaagagaaggcaagtcatccacggagaaccgttgcctctctcacggaagtcctacctg
gcatggatgggcttcactgcagagggaaccccgtgctgtattgactcggagggtgttgta
cgtatgctgaaccggaccctggggaacacatgggctcctgtctgcaacaccagagacacc
tgcaagagcaaatcagaccattgttgggttgttggggttcatgagaatccacagcagatc
aggtgcatcccatgtaaaggctcacgttttccacccaccctaccccgtcctgctgtggcc
gtcctgccctttaacctgccttattgccagaccactacagagaaaggccaaatggaggag
cagtactggcggtctatgctctttcataaccactttggctttctgtcatccagtggttat
gaaattgacagcgagggtcagtctcaggctgagaaagagcagcaggaactgctaatgaag
atgttcgctctgtcgtgtaaactggagcgtgagttccggtgtgtggagctggctgagctg
atgactcacagcgttgtgacgctcgccatccgttacgcatctcgttccaggcgcatggcc
ctggcacagagactcagtgaactcgccctggaaaaggccaatcagctgcaggaggaggag
caggaagatgatgatgagccggtctatcagagacacaccagtagagaatatagaggatcc
aataagatgagcagcagacaagcacaagttgagaatggctgtgaggaggaggaagagcag
gaagaatatccacaggaggagcaaatggatgcagaggattcaacagagaccaggaaacca
cgtttgaatccattcaaaaaaggaggaaaatcacctgaaaggccctctcccaaaccagtg
agcagagaaggacgcgtgaaccctttcaaggtgtctggtgcagaaaagtcctcaagttct
ccagctggtcagcccagaacgactaatgttttggacagcatgacgatgtccagcagaaaa
cctgcaactctcagcggaacatcaaaacagggcaaagccccagtcctgaagcccctggca
cccaaaccaaagtccaagacccaggccacactgctgcagatgagtgcctctaaaggaaac
cgtaagaaacaggaggacagccaatcagaagcagagaaaatgaaaccagttcctgcggct
acacctccagtatcagcggagaatatcgaaaacagaaagccaaaaactggctttcagctg
tggctggaggagaataggaagagcattctcgcagacaatcctgactttgaagaaatggat
gttatcaaggaaggcatggggcgtttccgcactctctcagcagaggaaaggctgaactgg
acggagagagcaaagggcgactcggaccccaagaaaagaaagcgcgaagatgaagcagga
caagtaaatgaacatatggattcagaggagggcagtgccaaaaagaaaaagccactggat
acttctgctaaactttctgcatttgcatttaacaaagattag
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integrated database retrieval system
