Rhinichthys klamathensis goyatoka (western speckled dace): 130101526
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Entry
130101526 CDS
T09701
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130101526 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130101526 (exosc6)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130101526 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
130101526
NCBI-ProteinID:
XP_056123273
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MPFDSRRIRGPEESQSPLLFLSPDKVPEASSRQGVRGNGDVRPVFARCGLVSQAKGSAYL
EAGNTKIICSVYGPREIERKDETDMKTGRLVCDFRLAPFSCMKRGAWIQGSEERDLSATL
LESLQPGVCLHRYPRSQIEVNVIVLENDGSILAHAITCASMALADGGIEMYDVVLGCALR
QNGNTCLVDPSHSEECGSWQDGYGENRGCVTVALLPNLNQVSGLNADGEMREDTLTDAVR
TCLDGCHKLYPVVQQALTRAVKRKAPPPEK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgactcgagacgtatccgtggaccggaggagtcgcagtccccgctgctcttt
ctttccccagacaaagttcccgaggccagcagcaggcagggcgtccgagggaatggagac
gtgcggccagtgtttgcgcgctgtgggctggtcagccaggcgaagggctctgcgtacctc
gaggctggaaacaccaagatcatatgctcggtgtacggaccgagagaaattgaacgtaag
gacgaaacagacatgaaaaccggccgccttgtttgcgacttcaggctcgcgccgttttcc
tgtatgaaacggggtgcctggatccaaggcagcgaggaacgagatctgtccgcgactctg
ctcgagagtttgcagccaggagtttgcctccacagatacccacgttcgcagattgaggtt
aatgtcatcgttctggagaatgacggctcgattcttgcacatgcgattacctgcgcctct
atggccctggcggatggcggtattgaaatgtatgatgtggtgttaggttgtgcgctgcgg
cagaatggaaacacgtgcctcgttgacccatcacactcagaggagtgtgggagctggcag
gatggatacggggagaatcggggatgtgtcaccgtggctctgcttcccaatctgaatcaa
gtgtctggtctgaatgcggacggggagatgcgggaagacacactgactgatgctgtgaga
acctgcctggacggctgtcacaaactctatccggtggtacagcaagcgctgacgagggct
gtgaagagaaaagctcctccacctgagaaatag
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