Rhinichthys klamathensis goyatoka (western speckled dace): 130101538
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Entry
130101538 CDS
T09701
Symbol
tpma
Name
(RefSeq) tropomyosin alpha-1 chain
KO
K10373
tropomyosin 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04260
Cardiac muscle contraction
rkg04261
Adrenergic signaling in cardiomyocytes
rkg04814
Motor proteins
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130101538 (tpma)
04820 Cytoskeleton in muscle cells
130101538 (tpma)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130101538 (tpma)
04261 Adrenergic signaling in cardiomyocytes
130101538 (tpma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130101538 (tpma)
04147 Exosome [BR:
rkg04147
]
130101538 (tpma)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
130101538 (tpma)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of microglial cells
130101538 (tpma)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CCDC39
CLZ
Sec2p
Rod_CreS
ATG16
TMF_DNA_bd
DUF3450
FKBP15
Lebercilin
DUF745
PUMA_CC
Laminin_I
HAUS1
CC_Bre1
SlyX
EzrA
CENP-F_leu_zip
MscS_porin
ADIP
DUF1664
DUF16
Motif
Other DBs
NCBI-GeneID:
130101538
NCBI-ProteinID:
XP_056123283
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEGDKKGAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEAELERTE
ERAELNEGKCSELEEELKTVTNTMKSLEAQAEKYSAKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagcagagcaggctgagggtgataagaagggagcagaggacagaagcaaacagcttgaa
gatgacctggtcgccctgcagaagaaactgaagggcacagaggatgagttggacaaatac
tccgaggcccttaaggatgctcaggaaaaactggagctggctgagaagaaagctgccgat
gctgagagcgacgtcgcttccctgaacagacgcatccagctggttgaggaggagttggat
cgcgctcaggagcgtctggccactgctctgcagaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtcattgagaacagggccctgaaggatgaggagaag
atggagctgcaggagatccagttgaaggaggccaagcacattgctgaggaggctgaccgc
aagtatgaggaggtggcccgtaagctggtgattgttgaggctgagctggagcgtactgag
gagcgtgctgagctcaatgagggcaagtgctctgagctggaggaggagttgaaaactgtg
accaacaccatgaagtctctggaggcccaggctgagaagtactccgctaaggaggacaaa
tatgaggaggagatcaaggtcttgactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagaccattgatgatctggaggatgaattg
tatgctcagaaactcaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacctccatttaa
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