Rhinichthys klamathensis goyatoka (western speckled dace): 130101577
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Entry
130101577 CDS
T09701
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130101577 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130101577 (rorab)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130101577 (rorab)
Nuclear receptors [BR:
rkg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130101577 (rorab)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
130101577
NCBI-ProteinID:
XP_056123342
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All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MKMESPPESVTVPRKSASEAGASVEDSPVKLDSKAETDKPAPVRRQSCSSTNKDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKMGDETEKGREP
QPPGEAEPLTPSYALSTNGVTELPDDLSGYVNGQTPEEGKADPAIGGFYLDIQPSPDQSG
LDMDGIKLEPVCDLSSDSGLDQYCCYSNGESSPPDSDLEHLSENICKSHLETCQYLREEL
QPSNWQTVLQTDLDTYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVYFDSKYAGPEVFKALGCDDLITSVFEFAKSLNSLEL
SEDEIGLFSSYVLMSADRSWLQEKTRVEKLQQKIKIALQNLLQKNQRDEGILTKLVCKVS
TVRMLCRRHMEKLSAFRALYPETVQTRFPPLYKELFGSEFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggagtctccgccagagtccgtcacggtgccgcgcaagagcgcttctgaagcg
ggcgcttcggtggaggacagcccggtgaaactggacagcaaggctgaaaccgacaaacca
gctccagttcggcggcagagttgctcaagtaccaacaaggatgtgtcctcagcaaagaaa
acacacacgtctcagattgagagtattccctgtaaaatctgtggagataaatcatcaggg
atccattatggtgttatcacctgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcatattcatgtcctcggcagaagagctgtctgatcgaccggaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttagcagtgggcatgtcaagagatgct
gtgaagttcggccgcatgtctaagaagcagagggacagtcttttcgcagaagttcagaaa
caccgccaacagcagcaggaggagaaaatgggtgatgagacagagaaggggcgggaacct
caacctccaggagaggcagagccactcacaccctcttacgccctgtccaccaatggcgtc
acagagctcccagatgacctcagtggatacgtgaatggtcagaccccagaggagggaaag
gcagatccagcaattgggggattttacctggacattcagccctctccagaccagtcaggt
ctagacatggatggcattaaactagaacctgtatgcgaccttagctcagactctggcctg
gatcaatattgttgctatagcaatggagaatcttcacctcctgacagtgatctagaacat
ctgtcagagaacatctgcaagtctcacctggagacgtgccagtatcttcgagaggaacta
cagcccagcaattggcagacagtcttacagaccgacctggacacgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcggttaaagtcaccgaagctgtgcagtatgtggtt
gagtttgccaagcgcattgatggattcatggagctctgtcagaatgatcagatcgtgctg
ctcaaagcaggttctttagaagttgtctttgtgaggatgtgtcgggcatataactcccag
aacaacactgtctattttgacagcaaatatgctgggccggaggtcttcaaagctctgggc
tgtgatgatcttatcacctctgtgtttgagtttgctaagagcctgaactctctagagcta
agtgaggatgagattggcctgttttcatcatacgtgctgatgtctgcagatcgctcctgg
ctgcaggagaagaccagagtggagaaactccagcagaagatcaagatcgccttgcagaac
ctcctacagaagaaccagagggatgagggaattctcacaaagcttgtctgtaaagtgtcc
accgttcggatgttatgccgtcgccacatggagaaactgagcgcattcagagctctttac
ccagaaacggtccaaacacgcttccctccactctataaggagctgtttggctcagaattt
gagcaggttctgcctcaggaggcctga
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