Rhinichthys klamathensis goyatoka (western speckled dace): 130101664
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Entry
130101664 CDS
T09701
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130101664 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130101664 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130101664 (shhb)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C46: hedgehog family
130101664 (shhb)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Morphogens
130101664 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DUF7764
Peptidase_M15_3
Hom_end_hint
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
130101664
NCBI-ProteinID:
XP_056123461
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MDVRLHLKQIACLCFISLLLTPCGLACGPGRGYGNRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKHEGKITKDSERFNELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGTGTVTLADGMRKHIRDLKVGDRVLASDERGNVLFSD
FIMFMDHDPKTKRQFVVIETSEPFTKLTLTAAHLVFIGNASASLGVTATFASNVKPGDKV
LVSDDTRRTLKSVTVKRIYNEEHEGSYAPVTAHGTIIVNQVLASCYAVIENHTLAHWAFV
PVRLSHKMMTWLFPARDSNVTFQEDGIHWYSNMLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgcttgtctgtgttttatcagcctgcttctg
acgccttgtggattagcctgtggtcctggtagagggtatggaaaccgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgtcgccgagaaaacgcttggg
gccagcggaaaacacgaaggcaaaatcacaaaggattcagaaagatttaatgagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgcggacagactg
atgaccaagcgctgtaaggacaagttaaattcgttggccatatccgttatgaaccagtgg
ccgggcgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccattccgaagaa
tctttgcactacgagggacgcgcagtggacattactacctcagacagggataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtctattacgaatct
aaagcccacatacactgctccgtcaaagcagagaattcggtcgctgctaaatcaggggga
tgttttcctggaacgggtacagtgacacttgcagacgggatgaggaaacatatcagagat
cttaaagtgggcgaccgggttttagcatccgacgagagaggaaatgtcttatttagcgac
ttcattatgttcatggaccacgatccgaaaacgaaaaggcaattcgtcgtcatcgagacg
tcagagccttttacaaagctgaccctcacagccgcgcacctagtcttcatcgggaacgct
tcagctagtttgggtgtaacggcaacatttgcaagcaacgtgaagcccggagataaggtt
ttggtgtcggatgacacacgcaggaccctcaagagcgttaccgtaaagaggatttacaat
gaagagcacgagggctcttacgcgccagtcacagctcacggaactataatagtgaatcag
gtgctggcttcgtgctacgcggttattgagaaccacacattggcacattgggcttttgta
ccggtcaggttaagtcacaagatgatgacgtggctttttccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaatatgctgtttcacatcggatcttgg
ctgctggacagagactctttccatccactcgggatttcacatttaagttga
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