Rhinichthys klamathensis goyatoka (western speckled dace): 130101685
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Entry
130101685 CDS
T09701
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130101685 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130101685 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130101685 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
130101685
NCBI-ProteinID:
XP_056123486
LinkDB
All DBs
Position
Unknown
AA seq
1513 aa
AA seq
DB search
MLKLPAAWSGSIFNRPSGHTRSWLYATICRVAALFLFSGVPFCRLPHTRRRAWIFTSFSF
FWSLPLLLFEKATLTWHKISGKKIEKKLSALSKKEKRSHLAVDTDDEIIGYVVPVFRSSH
LATQDLMETQEEVKEEGVGYVVMRNLFSRETDFKMKTVKKTRETSMRESAERLTLSKKMH
EKAEFQKKMNPDSLTHPPEFIVKPRGQTVWEGKSLTLHCTVAGWPKPRVAWYKNNVLIDA
KAHPEKYSAESQYNMHSLEIKNCNFSDTAEYGISALNVKGESSAFASVIIKRFKEGEEVI
ERPYGYSPEYGVTFNTAIIDKFDVSFGREGETMSLGCTVIVYPTVKRYQPEIVWYRNGVV
LSPSKWVHMHWSGERATLTLVHLNKEDEGLYTLRVNTKSGFDTHSAYVFVRDADVEEEGV
PVAPLDVRCHDANKDYVVVTWKQPAVEGSSSIMGYLIDRLEVGTHHWTQCNDTPVKYARF
PVTGLIEGRSYTFRVRALNNAGVSRPSRASDTVVAMDPSDRARLRAGPSAPWTGMIKFTE
EDPTVGVVPGPPTDLAVTEATKSYVVLSWKPPIQRGHEGVMYYVEKCLVGTDTWQRVNTG
MPVKSPRFALFDLAEGKSYSFRVRSCNSAGVAEPSEETGATTVGDRLDLPSVPGPVVPIR
NTDTSVVVRWGASKEVKNLVGYYIEVSINGSGVWVPCNNKPVKGARFVCHGLNTEDKCVF
RVKAVNAAGYSGSTAESEACIVQASIAVPSPPTGVTLLERVRDYMVLGWQAPSNTGGADI
RGYYLDYRTVKDGVTSKWHELNLQAVTGTSYKVTDLKENKFYQFQVRAFNQAGISEASIP
TVTLECKEWTVAVPGPPRGLRVQEVRKDSMVLLWELPTFNGRSPVTGYYVDYKEENGKWR
CFQERSTKHTYMQLSGLQEGVSYRLRVHAKNLAGVGGASKPTDAILAETRPGTNEIVVDV
DDDGVISLIFECSDLKEDSQFVWSKNYEAFTDTSRLTIQTAGGKSRAIFNDPSLDDLGIY
SCVVTNTDGVSASYTLTEEGLKRLLDISRDHQFPIIPFKSEMAIELQEKGRVRFWAEVAK
FTSNCQVEYVFNDNIVHEGKKYTVNFNKTTGIIEMFMDSLEVTDEGTFTFNLVDGKATGR
TSLVLIGEEFAELQKKSEFERAEWVRRQGPHFVEYLSFEVTPECDVHLKCKVGNIKPATE
IAWFKDGIEIEEDDEDAKKIGKSDEVLTFDIGKLVIKSEKAQRKKKPETEESPSKPKISK
KDAGVYEVKLKDERGKDKTLLNLTDAGYQAVLNEVFRVIANSSTELKIVSTEHGIILYSF
VVHYIEDLRVGWLHKESKISHSDRVQCGVTGEQLWLKINEPTEKDKGKYAIDIFDGQGSV
KRVLDLSGQVWEEAFEEFKRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGDP
VPEVSWMKNEKPLVCDEHYTLKFEHGKFASITISAVTTTDSGKYALLVKNKYGTEAGAFT
VSVYMPDDEAEKK
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaactgcctgccgcctggtcagggtctatatttaacagacccagtggccataca
aggtcgtggctgtacgctacaatctgcagagtggcagcattatttttgttcagcggagtc
ccgttctgtcggctgccccatacccgccgccgtgcctggattttcactagcttctcgttt
ttttggagtttgccccttcttctttttgaaaaagcaactttgacctggcacaagatctca
gggaagaagattgagaagaaactgagcgcgctctccaaaaaagaaaagcgctcgcacctg
gcggtggacacagacgacgagatcattggatacgttgtgccagtcttcagaagcagtcat
ttggccacccaggatctgatggagactcaggaggaggtgaaggaagagggtgtggggtat
gtcgtcatgaggaacctgttctccagggagaccgacttcaagatgaaaactgtgaagaag
accagagagaccagtatgagagagtctgctgaacgcctgactctgagcaagaagatgcac
gagaaagcagaattccaaaagaagatgaatccagacagtttgactcaccccccagagttc
attgtgaaaccacgtggccagaccgtgtgggaggggaagagtttgacgctgcactgcact
gtggcaggatggcccaaaccccgcgtggcctggtacaaaaacaatgttttaatcgatgct
aaggctcaccctgagaaatactccgcagagagccaatacaacatgcattctctggaaatt
aagaactgtaattttagcgacactgctgagtacgggatctctgcactcaacgtgaaggga
gaaagttctgcgtttgcttctgtcattattaaaagattcaaagaaggagaagaggtgatt
gaaaggccctatggttacagccctgaatatggtgtgaccttcaacactgctatcattgac
aagtttgacgtttcttttggccgtgagggagaaaccatgagtttgggctgtacagtcatt
gtctaccccactgtgaagcgctaccagccagagatagtgtggtacagaaatggtgtcgtc
ttgtcaccttctaagtgggtgcacatgcactggagtggtgagcgtgccactttgactctt
gtgcatctgaacaaagaagatgagggtctctacactctgcgtgtcaacactaagtcaggc
tttgacacccactctgcctatgtgtttgtcagagatgctgatgtggaggaggagggggtt
cctgttgctcctcttgacgtgcgttgtcatgatgctaataaagactatgtggttgttacc
tggaagcagcctgcagtggaaggcagcagttccattatgggctacctcattgacaggttg
gaggttggcactcatcattggacccagtgtaatgacactccggtgaagtatgcccgtttt
cctgtcactgggcttattgagggccgctcctacacctttagggtgcgagccctcaacaat
gctggtgtgagccggccgtcccgggcctctgacaccgtagttgccatggacccatcagac
cgggcccgtcttagagctggtccttcggctccatggacgggaatgatcaaattcacggag
gaagatcccacggtgggtgtggtccctggtccacctactgacctggctgtcactgaggcg
actaagagttacgtggtcctgagctggaaacctccaatccagagaggacacgagggtgtc
atgtattatgtggaaaagtgtttggtgggtacagatacatggcagagggtaaacactggg
atgccagtgaagtccccccgttttgccctgtttgaccttgctgagggcaaatcctacagc
ttccgcgtccgcagctgcaactctgctggagttgcagagccgtcggaggaaactggggcg
actactgtgggagacagattggacctgccctctgtcccagggcctgttgttcccatcaga
aacactgacacttctgtggttgtgcgctggggggcatctaaggaggttaagaatctggtg
ggctattacattgaggtcagcatcaatggcagcggtgtgtgggttccttgcaacaacaag
ccagtcaaaggcgctaggtttgtgtgccatgggctgaacactgaggacaaatgcgtgttt
agggtgaaggctgtgaatgctgcaggatacagtggaagcaccgcagaatctgaggcctgc
attgtgcaagcgagcattgccgtcccaagccctcccaccggtgtgacccttctggagagg
gtccgtgactacatggtgctgggctggcaagctccttctaatactggtggagcagacatc
agaggttactacctggactacagaacagtgaaggatggagtcacaagcaagtggcatgaa
ctcaacctccaggcagtcactggcacatcttataaggtgacagacctgaaggaaaacaaa
ttctaccagttccaggtgcgtgcattcaatcaagctggtattagtgaagcctccattccc
actgtcaccctggagtgcaaggaatggactgttgctgttccaggccctcctcgtggcctc
cgtgtccaggaggtgcgtaaagactccatggtgcttctgtgggaactgccaacattcaat
ggccgcagtcctgtgactggatattatgtggactataaggaagagaatggcaaatggaga
tgtttccaagagagatccacaaaacatacttacatgcagttatctggtctccaagagggt
gtttcatacaggctgcgcgtccatgctaagaatctggcaggtgttggaggagcatcaaag
ccaactgatgcaattttggctgagacccgacctggcaccaatgagattgtggtggatgtg
gatgacgatggtgtgatctctctgatctttgagtgctccgatcttaaagaagactcccag
tttgtgtggtctaaaaactacgaggccttcactgacacgtctcgtcttaccattcagact
gctgggggcaagtccagagccatctttaatgacccgtcattggatgacttgggcatttac
tcctgtgtggtgaccaacactgacggtgtctctgccagctacacgctcactgaggaagga
cttaagcgcttgttggacatcagccgtgaccaccagttccccataattcccttcaaaagt
gaaatggccattgagctgcaggagaagggccgtgtgcgcttctgggccgaagttgccaag
ttcacttctaactgccaagtggagtatgtcttcaatgataatatcgtccatgaaggaaag
aagtacacagtgaactttaacaagaccactggcatcattgagatgttcatggattcactg
gaggttactgatgaaggaaccttcacattcaaccttgttgatggcaaagcaactggtcgc
accagcttagtgcttatcggagaagagtttgctgagcttcagaagaaatctgagtttgag
agagcagagtgggtcagaaggcaaggtcctcacttcgttgagtatcttagtttcgaggtc
accccagaatgtgatgtgcatctgaaatgcaaggttggaaacatcaaacctgccactgag
attgcctggtttaaggatggaattgagattgaagaggatgatgaggatgctaagaagatc
ggaaaatctgatgaagtgttgacctttgacattggcaagcttgttattaagagtgaaaag
gcacaacggaaaaagaaacctgaaaccgaagaaagtccaagcaagccaaaaatttcaaag
aaagatgcaggagtgtatgaggttaaactgaaggatgaaagaggaaaggacaaaactttg
ctgaacctgacagatgcaggttatcaagcagtgctgaacgaagtgtttagagttattgcc
aactcttctactgagctcaagattgtgagcactgaacatggaatcattctctactcattt
gttgtgcactatattgaagatctccgtgttggctggcttcacaaagaatcaaagatctcc
cactcagacagagtgcagtgtggagtcaccggagaacagctgtggctcaaaattaacgag
cccaccgagaaggataagggcaaatatgccattgatatcttcgatggccaaggcagcgtc
aagagagttcttgacctgtcaggacaagtatgggaggaagcatttgaagaattcaagaga
ctgaaggcggcggccatagcagagagaaaccgtgcccgtgtggtaggcggcctgcctgat
gtagtcgccattcaggagggcaagtccctcaacctcactggcaacgtgtggggtgatcct
gttcccgaggtcagctggatgaagaatgaaaaaccgctggtgtgtgatgagcactacaca
ctgaagtttgagcatggcaagtttgccagcatcaccatctctgctgttaccacaaccgac
tctgggaaatatgccctgctggtgaagaacaagtatggcacagaggcaggagcgtttact
gtcagtgtctacatgccagatgatgaagcggagaagaagtag
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integrated database retrieval system
