Rhinichthys klamathensis goyatoka (western speckled dace): 130101745
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Entry
130101745 CDS
T09701
Symbol
abcf2a
Name
(RefSeq) ATP-binding cassette sub-family F member 2a
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130101745 (abcf2a)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
130101745 (abcf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_28
AAA_15
AAA_22
MMR_HSR1
AAA
RsgA_GTPase
AAA_16
AAA_18
AAA_33
NACHT
AAA_30
AAA_14
VapE-like_dom
AAA_25
RNA_helicase
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
130101745
NCBI-ProteinID:
XP_056123564
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARQRTKKPEDGVDGDEEKPEDQQNGAAEFNGVASLTKELDEF
ELKKTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTG
KSMLLSAIGHREVPIPEHIDIYHLTREMAPSEKTALQCVMEVDEARIQLEREAERLAHED
SECEKLMELYERLEELDADKAEMRASRILHGLGFTAAMQQKKLKDFSGGWRMRVALARAL
FLKPFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIIHLHQRKL
KYYTGNYDQYIKTREELEENQMKRFNWEQDQITHMKNYIARFGHGSAKLARQAQSKEKTL
QKMVASGLTERVVNDKTLSFYFPPCGKIPPPVIMVQNVSFRYSDNTPHIYNNLEFGIDLD
TRVALVGPNGAGKSTLLKLLAGELLPSDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYM
MKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQTPHMLFLDEP
TNHLDIETIDALAEAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWTRDILAYKE
HLKSKIDKQMHDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgatttagcaaaaaagaaggcggcaaagaaaaaagaagcagccaaagctcgc
caacgtacaaagaagccagaggatggagtagatggtgatgaagagaaaccggaggaccag
cagaatggagcagctgagttcaatggggttgccagtttgacgaaggagctggatgagttt
gagctgaagaaaactgaggcccgtgcagtgactggcgtgttggcatctcatcccaacagc
actgatgtgcacatcagcagcttgtctctcacctttcacggacaggagctgctcagtgac
actagtttggagctcaactctggccgtcgatatggccttatcggactcaatggaactgga
aaatcaatgctgctgtcagcaattggtcacagggaggtgccgattccagagcacatagat
atctaccacctgacccgtgagatggcaccaagtgagaagaccgctctgcagtgtgtgatg
gaggtagatgaggcgaggatccagctggagagagaggctgaacgactagctcatgaggac
tctgaatgtgagaagctgatggagctgtatgagcgtttggaggaactggatgctgataaa
gcggaaatgagggcctcgcggatcctccacggtctgggcttcactgctgccatgcagcag
aagaaactcaaagacttcagcggtggctggaggatgcgtgttgctcttgctcgagcactg
ttcctcaagcctttcatgttgctgttggatgagccaacaaaccacctggacttggatgca
tgtgtgtggctggaggaagagctcagccagtttaaaagaattctggttttaatatcccat
tcccaggacttcctcaatggcgtttgtaccaacattattcatctgcaccagcgcaagctt
aaatattacacgggtaattatgaccagtatataaagaccagagaggaactggaggagaat
cagatgaagcggtttaactgggagcaggaccagataacgcacatgaagaactacattgct
cggtttggtcacggatctgccaagctggccagacaagctcagagtaaagagaagacgtta
cagaagatggtcgcctctggtcttactgagcgtgttgtgaatgacaagaccctgtcattt
tattttcctccctgtgggaagatcccccctcccgtcattatggttcagaatgtcagcttc
aggtattcggataatacgccgcatatttataataacctggagtttggaattgacttggac
acacgggtggcccttgtagggcccaatggggctggcaaatctactttgctgaagctcctt
gctggagagctcctgccttcagatggtatgattagaaaacactcccatgtgaagattggg
cgatatcatcagcatctaacagagcaattggagcttgacctttcacctctggaatacatg
atgaagtgttaccctgagattaaggagaaggaagagatgaggaaaatcattggccgctat
ggactcactggcaaacagcaggtgagccccattaggaatctgtctgatgggcagaagtgt
cgtgtctgctttgcctggctggcctggcagactccccacatgctctttcttgatgagccg
accaatcaccttgacattgaaaccattgatgctctggctgaggcgatcaacgaatttgag
ggtggaatgatgctggttagccacgacttcaggcttattcagcaggtggctcaggagatc
tgggtttgtgaaaagcagaccatcacaaaatggaccagggacattctggcttacaaggaa
cacctaaaatcaaaaatcgataaacagatgcatgacttatag
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