Rhinichthys klamathensis goyatoka (western speckled dace): 130101814
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Entry
130101814 CDS
T09701
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130101814 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130101814 (snx27b)
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Others
Others
130101814 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130101814 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
USP7_C2
PDZ_2
VirE3
SNX17-31_F2_FERM
DarA_N
RA_3
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
130101814
NCBI-ProteinID:
XP_056123638
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MADVVEGDGTRSAAPSTLHSAARNGSGMSSATCAGGLVTTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAILSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAIVTKIGMDTITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVGETSYQLQKLSEQRKMTMYL
GILRTCEGYNEITFPHCSCDSRRKGHVVTAISIHHFKLHACTDDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKD
NKNCSKDEYLPAVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagacggcactcgctccgctgccccttccacgcttcactcg
gcggctcgcaacggctccggcatgagctcggcgacgtgcgccggtggcctcgtcacgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggattcgggctacggcttt
aacgtccgcggtcaagtgagcgaaggagggcagctgagaagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggtgcagcagatcgagctggaatc
tcaaaaggggaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caagtggtagatctcatccgagcaggagagaaagagttggtcttggccattctgtcggtt
cctcagccagagacggacagtcttgatcccggggacgatggctcttcacagtcctgctat
gactacagtgacaagcaggccgtgcccatctcagtgcccacctacaaacatgtggagcag
aacggggagaagtttgttgtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgctatcgagagtttgccatcttgcatcagaatctgaagagggaatttgctaactttgca
tttcccaagctgccagggaaatggcctttctccctgtctgagcagcagctagatgctcgc
agacgagggctggaggaatacttggagaaagtatgttcggttcgggtaatcggggagagc
gacgtcatgcaggagtttttgtcagagtctgatgagaactataatggtgtttctgatgtg
gagctaaggatagcaatgccagacaaaactacagttacggtccgggtgagaaagaattgc
acaacagaccaggtctaccaggctatagtaacgaagattgggatggacaccattactgca
agttattttgctctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagtttccacacaagctgtatgtgcagaactacacatctgccatcccaggcacctgcctc
acactccgcaagtggctcttcaccacagaggaagagattcttctcaatgacaacgagctg
gctatcaactattgcttccatcaggctctggatgatgtgaaaaagggatttatcaaagtg
ggagagacatcctaccagctccaaaagctctctgaacagaggaaaatgaccatgtattta
ggtattctgaggacatgtgagggttacaatgagatcactttcccgcactgctcctgtgac
tcacgtaggaaaggtcacgtcgtcacagcgataagcatccaccactttaaactccatgcg
tgcacagatgatggcactctagagaatcaggtgatagcgttcgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtatgcgcgaggggagaag
aaacctcgctgggtcaaaatctttactccttatttcaactacatgcacgagtgctttgag
agagtcttctgtgagctcaaatggagaaaagaggttgaagaggaggccacagacaaggac
aataaaaactgcagtaaagatgaatatcttccagctgttgagacacagaagggatggagg
cacatgaatgaagagatcatctcctcttga
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