Rhinichthys klamathensis goyatoka (western speckled dace): 130101849
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Entry
130101849 CDS
T09701
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130101849 (cdh17)
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Major cadherins
130101849 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Syndecan
ECD
Motif
Other DBs
NCBI-GeneID:
130101849
NCBI-ProteinID:
XP_056123675
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MRGARLLHLTLLVSIAHGIGLEDKTGLLDHKVLDVPERTPVPYPIYQFTSASEGVSSYHV
SGETEGKIGISSDGWLYLEHPLEWSPEKNHHLDIEARSADGETVDGPYSVVLQVVDVNNN
NPVFSESQFSGRVREHSPAGFAFMQVFASDADDPNTVNAQLKFSIVNQIPNPENMFYFGI
NPDNGEIFITDQGAASLKARPAVTYSRGEVHGSPDVLRKKFEDYCIPKNNIPLENNPFYT
CVERVERRQVNLLMDPDYVLIVRAEDLGDPNALSSTTRVNIAIIQNLWVSPVPIAIRENL
DGEYPMYLTTVRSNDPTALYRLVQKERLPFPFTINQDGEIYATGPLDREEKNMYILVAMA
EDEHGVELEKPLEIVVRVEDVNDNPPVCDEGAVFEVQENEPIGNTIGVLPAHDSDEENTL
NSLLNYTLLSQTPTYPSDKMFTIDQVNGEIKVANQNFQRKKVPQYELTFRVADQVYIAEC
KVIIKVIDINNEIPVFEKKDYGTYRVPELAEVGTTLLIIKATDADDPGTGSSRVEYHISA
GDPHNLLAIEVDEATGAGRVYIARPLDYELQSVYNLQIDARNPEPLIEGLKYDENATAVV
VIQLVDVDEPPEFEVDTLDVNVPENITIGTVIMKAEAKDPEGKTIKLKMEGDEHNWFELD
ADSGELKTKAALDRETVEQISLTVIAYETEGDKQEGEMKVNIHLLDVNDNYPKLQWKQNF
ICMQDMTPLTLTAIDKDSDPYGEPFTFSINRKSPNFEIKPVDGTSAKLILKKKPSSDQNV
SVPINIKDNAGMGITQKFDVRICNCTKLGYCYMEPEAHSWKLSMGSTIGILAGIFGFIIL
SMVIVMYRIKKKDQTRAADGGETKAML
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgcacgtttgctacacttgacccttctcgtcagcattgctcatgggataggt
ctggaggacaaaacggggctattagatcataaagttttagatgtgccagagcgtacacct
gtgccttatcccatttaccagtttacatctgcatcggaaggtgtctcttcatatcacgta
agtggagagactgaaggaaagatcggtatctcttcagacggctggctatacctggagcat
cctctggaatggagccctgagaaaaaccaccatctagatattgaagcacgttcagcagat
ggcgaaactgttgatgggccttactctgttgttttgcaagttgtggatgtcaacaacaat
aaccctgtctttagtgagagtcagttcagtggcagggttagagagcattcacctgcagga
tttgcgttcatgcaggtgtttgcatcagatgcagatgatcccaacacagtaaacgctcaa
ctgaaattcagcattgtgaaccaaatccccaatcccgaaaacatgttttactttggcata
aacccagacaatggagagatatttataacagaccaaggagcagcgtctctgaaggccagg
cctgccgtaacatacagccgcggggaggtccatggcagtcctgatgtcctgaggaagaag
tttgaggactactgtattccaaagaacaacataccactagagaacaaccccttttacaca
tgcgtcgagcgtgttgaaagaagacaagtgaatcttctgatggatccagactatgtactg
attgttcgtgcagaagatttgggggatccaaacgctttgagcagcacgacacgagtcaac
atagctatcattcaaaacctctgggtcagccctgtaccaattgccattagagaaaattta
gacggggaataccctatgtatcttactacagtgcgcagcaatgatcccactgcactctac
aggctggtacagaaagaaagacttcccttcccattcaccatcaatcaagatggagagatc
tatgctacaggtcctctggacagagaagagaaaaatatgtacatattggtggccatggca
gaagatgaacatggcgttgagctggaaaagcccttggagattgttgtgcgggtggaggat
gtgaatgataaccctcctgtgtgtgatgaaggtgcagtgtttgaagtgcaggagaatgag
cccataggtaatacgattggtgttctgcctgctcatgatagtgatgaagagaacacactg
aactcattactaaactacacactcctgagccagacacctacctacccatctgacaaaatg
ttcaccatcgaccaagtaaatggtgaaatcaaagtagccaatcaaaactttcaaaggaaa
aaggtgcctcagtatgagctcacctttagagtggctgatcaagtttacattgcggaatgt
aaagtgatcatcaaggtcatcgacatcaataatgaaatccctgtcttcgagaaaaaagat
tatgggacctacagagttcctgaactggctgaagtgggcaccactttgctcattatcaaa
gccacagatgcagatgacccaggaacaggaagctctagggtggagtatcatatctccgct
ggagacccacataacctcttagccattgaggttgatgaagccacaggagcgggcagagtc
tacatcgctcggccactggattacgagctccagagcgtctacaaccttcagattgatgcc
cgtaatcccgagcccctgatcgaaggattgaaatatgatgaaaatgccacagcagttgtt
gtcattcagctagtggacgtggacgagcctccagaatttgaagtggacactcttgatgtc
aatgtcccagaaaacatcacgattggaaccgtaataatgaaagctgaagccaaggatcca
gagggaaagactatcaagttaaagatggaaggagatgaacataattggtttgagctggac
gctgactccggtgaactgaagactaaagctgctctggacagagagacggtggagcagatc
tctctcacagtcatcgcttatgagacagagggagacaagcaggagggtgagatgaaggtg
aatattcatctgctggatgtgaacgacaactaccccaaacttcagtggaaacagaacttc
atctgcatgcaggacatgacccccttgacactcactgctatagataaggatagcgacccc
tatggagagccgtttaccttctcaattaaccgcaagtcaccaaactttgagatcaaacct
gtggatggaacctcagcgaagctgattctgaagaagaagccctcaagtgatcagaacgtc
agtgttcccatcaacatcaaagacaatgctgggatgggtatcactcaaaagtttgatgtg
cgtatatgtaactgcactaaattgggctactgttacatggagccagaagctcacagctgg
aagctgagcatgggcagcaccatcggcatactggcaggaatattcggctttatcattctg
tccatggtcattgttatgtaccgaatcaagaagaaggatcagacgagagcagcagatggt
ggagagactaaagcaatgctctag
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