Rhinichthys klamathensis goyatoka (western speckled dace): 130102064
Help
Entry
130102064 CDS
T09701
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130102064 (gapvd1)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130102064 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
130102064
NCBI-ProteinID:
XP_056123932
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQIIQRLNNEVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKFLEDTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGERL
NHEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKLIERFTPTQQERLFGEKGT
DEYRRKVQAEVEANEAKLVTLVNTFIGYLKQNTYCFPQSLRWIVSQMYKTLARVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMSDADDGD
PRRKSSLLKFDKTCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVVFMTHNQLLALVDF
VRSVTAGDQLREEEHLALETLLANVPQSRTTKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAITCWEPSATALSAHIPLVTPFAGSRSRSRSNMAQEGEIEASSQESLQEVTPEE
VLVISFGSSQQTVPGMMSENEVLTLNLGDGGQGDAPVDDNKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEVESVSEGGPGPSGSNGAEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENALGSLLCLPV
LLDPYGSTISETTSEAWSVEVLPSDSEAADLKQEERLQELESCSGVGSTSDDTEVREVSS
RPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEDSAHGAHSLSCAP
SHADSLLAMFDPLSSGEGSTTGTIVRPKVHYPRPPHPPPDPPIPEASIMSHQEPRPPLFA
PHLAQGDLEHPKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRKTMMEERDSAGAFSTG
PTSSPSKDSLKGESEDRKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAEGELPVPIAGLR
KRDKPEKDEQGAERVPQDEHSMLRQNSKTQSAEAIMDKYIRYMEKRPTHSDGAGSGNYIG
QESCREGDSEHDSPKDEVLQNISADDLPDSASQTAPPQDKTFSFSDIKKKLRMALCSADS
VVFPIIPPATTRNGLPDHADPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSHLD
PRTCRKLLTAMAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLEHMESKMLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQD
AQMAIERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSKVVTANHKALQIPEVYLKEA
PWPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFVLIK
ANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaagcaggaacgcctgtatgtg
gcatcagagaagcagatcatccagcgcctcaacaatgaagtgctaaagacagcagagagg
ctctaccgcgcagcctggattgccaaacaacaaaggatcaacctcgaccgcctcatccta
accagtgtggaggcttctcctgcggaatgctgtcagcatgccaagtttctggaggacaca
cagtttgtggatggttataagacactgggctttcaggagagcatctacggggagttcttg
ggccggttgagagagaacccacgattggtggcatcctgtctggtggcaggagagagactc
aatcatgagcacacgcagggggtcatacacacagtcttcacctcactctatggcaactgc
atcatgcaagaggatgaaagctacctgctgcaggtgctgcgttacttggtggaatttgaa
ctaaaggagagtgacaaccctcgccgcctgttacggcgaggcacgtgtgccttcagcatc
ctcttcaaactcttctccgagggcctgtattctgctaagctttttctcactgcaaccctt
catgagcccatcatgcaactgctggtggaggacgaggaccatctagagacagatccatcc
aaactgatagagcgctttaccccgacccagcaggagcgcctgtttggggagaaaggcaca
gatgagtaccgcagaaaagttcaggcagaggtggaggccaatgaggccaagcttgtgacc
ctggtcaatacctttatcggctacctgaagcagaacacctactgcttcccacagagtctg
cgttggattgtgtctcagatgtataagacgctggcacgggtggagaggttagaggtcggg
gaggtgaggacgatgtgcaccgacttgctgctcacctgcttcatctgtccagccattgtc
aaccctgaacagtacggcatcatctcagatgcacccatcaatgaggtggctcgtttcaac
ctcatgcaggtggggcagttattacaacaattagccatgtctgatgcagatgatggagat
cctcgacgtaaaagcagtttattaaagtttgataagacgtgtgttgctgcctttttggat
gtcgtcattggtggaagagctgtcgagaccccacccatgtcgtcaatgaatttactggag
ggcctctcgcggacggtggttttcatgactcataatcagcttttagctctggtggacttt
gtgcgtagtgtcactgcaggcgatcagctcagagaagaagagcacctggctctggaaacc
ctactagccaatgtacctcagtcccgcacgacaaagagcaacagcctggagctcacgccc
tctaacacgccccagctctctccagcgaccacacccgccaacaagaagaacagacttccc
attggacaacagttggcagccataacgtgttgggagccctctgccactgccctgtccgct
catatacccttagtaaccccatttgcaggctctcgcagccgaagccgatccaacatggcc
caggagggtgagattgaagctagctcccaggagtctctgcaggaggtcacgcctgaggaa
gtgctggtcatctcgttcggatcctcacaacagactgtacctgggatgatgtcagaaaac
gaggttctgactctgaatcttggagatggtggacaaggagatgcccctgtcgacgacaac
aaactgcacggcaagcctgacaaaacgctgcgcttctcactttgcagtgacaacctggag
ggcatttctgagggcccgtctaaccgctccaattcagtttcttctttggacttggaggtg
gagtctgtgtcagaaggaggacctgggccatctggtagtaatggtgcagaggccttacaa
ctactggaacatgaacaagccactacacaggataatttagatgataaactgcgcaagttt
gagattcgggacatgatgggcctgacagatgatcgagacatttctgagacggtcagtgag
acttggagtactgacgtcctgggcagtgacttcgatcccaacatggatgaggaccgactg
caggagatagcaggggcggcagcggagaacgctttgggcagcttgctgtgtttgccggtg
cttctagacccgtatggttctaccatctctgagacaacgagtgaggcgtggagcgtggag
gttctgccaagtgactcagaagctgcagacctgaagcaggaggaacgcttgcaggagctg
gagagctgctccggtgtgggaagtacttcagatgacactgaggtcagggaggtcagctcc
cgacccagcaccccgggactcagcgtagtttcaggcatcagtgccacgtcagaggacatc
cccaataagattgaagacctacgctcagagtgcagctcagattttggaggcaaagactcc
gtgaccagtccagatggagaagactctgctcatggagctcacagtctatcctgtgcaccc
tctcatgcagattcactgctggccatgttcgatcccctctcctctggagaaggttcaacc
accggcaccatcgtccggcccaaggtgcactatccccggccccctcaccctccccctgac
ccgcccattccagaggccagtataatgagccaccaggagcctcgcccgccgctctttgct
ccccacctggcacagggtgacctggagcatcccaagcagaggcactcttaccctgaaagg
ctggtgagaagccgcagcacagatgtggtgtctgctggccgcagacccaacagcgatccc
ggactgaaccgcaagaccatgatggaggagagagactcggctggggctttctccacaggc
cccacctcttctcccagcaaggattccctcaaaggagagtctgaggatagaaaggacagt
gatgatgagaagtctgataggaacagaccctggtggaagaagcgctttgttcctgccatt
cctaaagtgctctattggactgcagagggtgaactcccagtgccgattgcggggctccga
aagcgggacaagccagaaaaagacgagcaaggagcagagagggtcccacaagatgagcat
tcaatgctcagacagaactctaagacccagtcagcagaggcaataatggacaagtacatc
aggtacatggagaaacgtcccacccacagtgatggagcaggttctggaaactatattgga
caagagtcttgtagagaaggagacagtgagcatgactctcctaaagatgaagtactgcag
aacatctctgcagatgaccttccagactctgccagtcagacagcaccacctcaggacaag
acgttctcctttagtgatattaagaaaaagcttcgcatggcgctatgctctgcagattcg
gttgtgtttcccatcattccacctgcaacaacacgtaacggcctcccggaccatgcagat
cccgaagacaacgagatcgtgtgctttctgaaggtgcagctggcggaggccattaacctg
caggataagaaccagatggctcagatccaggagactacgcgctgcgtcagccacctcgac
ccccgcacctgcagaaaactgctcactgccatggcagaggactacaggaagcgggctccg
tacatcgcctatctgacgcggtgccggcagggcctgcagacgtctcaggctcatctggag
cgactcctgcagagagtgttgagagataaagaagtggccaaccgctactttaccactgtc
tgtgtccgactgctcctggaacacatggagtctaagatgcttgacttcatcaaagcattt
cagggctgcacagcatctgacgataagacagcagccgtggaggatttcctgcgttacctg
tatggagccatggcccatgacgccatctggcagtatgccagtgaggagcagctccaggac
gcccagatggccatcgaacgcagcgtcatgaaccgcatcttcaaactggcattctacccc
aatcaggatggggacatccacagagacgagcttttccacgagcacattcagcgtctgtct
aaagtggtgacggccaatcacaaagccctgcagatcccagaggtgtatctgaaggaggca
ccatggccctcagcacaggctgagatcaggaccatcaatgcctataagaccccacgagat
aaggtgcagtgtatcctgcgcatgtgctccaccattatgaacctgctcagcctggccaat
gaggacgctgtacccggggcggacgacttcgtccccgtgctcgtctttgtcctaattaag
gcaaacccaccctgccttctgtccaccattcagtacatcaataatttctacgccagcagg
ctgagcggggaggagtgctattggtggatgcagttcactgccgccgtggaattcattaaa
accatcgacgatcgcaagtga
DBGET
integrated database retrieval system
