Rhinichthys klamathensis goyatoka (western speckled dace): 130102122
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Entry
130102122 CDS
T09701
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130102122 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130102122 (mlh3)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130102122 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL_C
Motif
Other DBs
NCBI-GeneID:
130102122
NCBI-ProteinID:
XP_056124002
LinkDB
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Position
Unknown
AA seq
1179 aa
AA seq
DB search
MIKSLPQDVQAKLRSGVAIFSLQQCLEELLLNSIDAGATCVAVKIDIEACKLQVIDNGSG
MCQEDMERVGYRYNTSKCSSLEDLDNLRFYGFRGEAISSIVSLAEMVEMSSRTKLSVKTY
VKTFNEANASDVLEAQTVRPSAGTTVSVYNLFHNMPVRRKRMDAVLETERIRQRVEAISL
MHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLREVNYVHEQFEMTGYIG
REGHYNNSLQFLFVNGRLLLKTCIHKTLNSLLKRVSSVARQNNSPTAYSLTSSPKQRGGC
DLHGVYVLNIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVTEFSMN
GSDGPSSSPLRNAKTPVAEQNLSAEQTREKCDALTEKKDNASGLEVSGGQMLEQVSINTE
TFSSEESDAEKALQGGDLRLQTTFAVATEMNNNRKEDENAICPNISHNDLPVTVNNNNIN
LMGSKKHKISILDVKGAQDSLKKFCFPNKISPKKRKLPLDDIQEDEHVFYGTSSKTCRAA
PCHKLTLSFETGSLDKFKRLFGKDPEKEQPSTEKTSHLQPESSRKSNDCFVGSTLCLDDI
DKPLLRNISDAYSPCSSECYAESSPWNEGEKISLAAKCSYFKHDKMALREVSRDTDFLPM
ETLSFPVVQDSNFKEKSHELEKENVLFGSFGTVDSLVHDSSEDNPVFALIEQDPTTIPSS
NLEDPHLCNKNVPSFLGSVNSVDEARVTSLHDPLCSNTGNEGQNTNDSVETIPMASSWLA
HYDSCLGKLVYINQVTGLSKYDSPPVEETQVSCTTDVTNMAVSVISRTGFEYRCYPFHTD
IVLPFLPKPRAERALNSGTDSREDAQGPDSLSTLFSKWSNPVFIRPPEVSVDVTSGQAES
LAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTTEQDVSESSTNEGNLLVLVDQ
HAAHERVRLEGLVTDSYEDDPDTPGKKRLCSSSVTPPLEINVTEEELRLLRSCQAFLRGL
ALDVRFPKSESLNVLLERLPTCFIEKESTELRRGRRSVIKTIAEDYLREHIELLHSTGRA
RGTLPLTVHNVLASQACHGAIKFNDILSKEECCSLVSSLSSCHLPFQCAHGRPSIVPLAD
LHHLEDQQDLPKPNLRKLRRMYKSWKLYGKDQSLAQNKA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtttgccccaagatgttcaagcaaagctgcgctctggtgttgctattttc
tcattgcagcaatgtttggaggagctcctattgaacagcattgatgcgggagcaacatgt
gtggctgtcaaaatagacatagaagcatgcaagctgcaggtgatcgacaatggctcaggg
atgtgccaggaggacatggagagagtgggataccgatacaacacaagcaaatgcagctcg
ctggaggatctggataatctcagattttatgggttcagaggggaagcgatttccagtatt
gtctcccttgcagaaatggttgaaatgtcatctaggactaagctgtcggtgaaaacatac
gttaaaacctttaatgaagcaaatgcatcggatgttttagaagctcaaactgttcgtccc
tctgcagggacgaccgtgtccgtctacaatctcttccacaacatgccagtccgaagaaag
agaatggatgctgttttagaaaccgaacgcatccgtcagagagtggaggccatatctctg
atgcacccatctgtgtcattcacagtgaaaaaagaaaattcggctcacatgatggtgcag
ctctctaaaacaagcagtacctattacaggtttgtgcagattcatggcttgaatcgagcc
caaaagctcagagaggtcaattacgtccatgagcagttcgaaatgactggttatatcggt
cgtgagggacattacaataacagcttgcaattcctatttgtaaatgggaggcttcttctg
aagacatgcattcataaaacactcaacagccttctgaagagagttagcagtgttgcgaga
caaaacaacagcccaaccgcatattcgttaacatcgagccccaaacaaagaggcggatgt
gatctccatggcgtctatgttttaaatatcaaatgccattactcagagtatgacatatgc
ctcgaaccagccaagtcactgatagagttcaaagactgggataatgtactcatctgcatt
gaagaaggagtaaaagcatttcttactaaggaaaatctggtgacagagttttccatgaat
ggcagcgatggtccatcaagtagtccattgaggaatgcaaagactcctgtggcagaacaa
aacctcagtgctgagcaaacgcgtgaaaagtgtgacgcactgactgagaaaaaggataat
gcaagtggtttggaagtctctggtggtcaaatgttggagcaagtgtcaataaacaccgaa
accttttccagtgaagaatcagacgctgaaaaagctcttcagggtggcgatttgcgcttg
cagaccacatttgcagttgctacagaaatgaataacaatcgcaaagaagatgaaaatgca
atttgtcctaatataagccataatgatttgccagttactgttaacaacaacaacataaat
ttgatgggaagcaaaaaacacaagatttcaattctggatgtaaaaggggcgcaagatagt
ttaaaaaaattctgcttcccaaataaaatttctccaaaaaagagaaagctgccattagat
gacattcaagaagacgaacatgttttttatggtaccagctcaaagacttgcagagctgca
ccatgtcataaattaactctgtcttttgaaacaggatctcttgacaagttcaaaaggttg
tttgggaaggatcctgaaaaagaacaaccaagtacagaaaaaacaagccatttacaacca
gaatcctctagaaaatctaatgactgctttgtaggatctactttgtgcttagatgatata
gacaagcccttattgaggaacatttcagatgcttattctccatgtagttctgaatgttat
gcagaatcttcaccatggaacgagggagaaaaaatatcattggctgccaaatgttcctac
ttcaaacatgataaaatggcactcagagaggtcagcagagatacagactttcttcccatg
gaaacgttgtcttttccagttgtacaagactcaaactttaaagaaaagtcccatgaatta
gaaaaagaaaatgtattatttggatcctttggaactgttgattcgcttgtccatgattct
tctgaagacaacccagtcttcgctctgattgagcaggacccaacaacaataccttcctca
aatttagaagaccctcacctctgcaacaagaatgtgccttcatttttgggaagtgtgaac
agtgttgatgaagccagagtaacctctctgcatgatcctctgtgcagcaacacaggaaat
gaaggtcagaatacaaatgacagtgttgaaacaatcccaatggccagcagctggctggct
cattatgacagttgcttaggaaagctagtttacataaaccaagttacagggctcagcaaa
tacgactctcctcctgtggaggagactcaagtgtcatgtaccacagatgtcactaacatg
gcggtcagtgttatttcaagaacaggatttgagtacaggtgttatccatttcacacagat
attgtacttccctttctgcccaaacccagagcagaaagagctcttaactctgggacagac
agcagagaggatgcccaaggtcccgattcattgtcgactttattctcaaaatggagtaac
ccggtgttcatacggcctccagaggtttctgtggatgtaaccagcggtcaagctgagagt
cttgctgtaaagatacacaatattcttttcccctaccggtttaccaagaatatgatccac
acaatgagagtcatcaatcaagtggacaagaagttccttgcttgtttgataaatacaaca
gaacaggatgtgtctgaaagcagtacaaatgaaggaaatcttctagtgttggttgatcaa
catgctgcccatgaaagagttcgactggaggggttggtaacagactcttatgaggatgac
ccagacacacctggaaaaaagagactgtgttcttcaagtgtaaccccacccttggagatt
aatgtaacagaggaggaattgagacttctgaggtcttgtcaggccttcctgaggggtctt
gctttagatgtaaggttcccaaagagtgagtcactgaatgtgttgttggagagacttccc
acatgtttcatcgagaaagaaagcacagagctccgccgtggaaggcggtcagtaattaaa
accattgcagaggactacctgcgagaacacattgagcttctccactcaacaggaagagct
agaggaactctgcctctgacagtacataatgttctcgcttcacaagcgtgtcatggagca
attaagttcaatgacattttgagtaaagaggagtgctgtagtctggtgagctcgctctcc
tcttgtcatcttcctttccagtgtgctcatggaagaccttccattgtccctctggcagat
cttcaccacttagaagatcaacaggatcttcccaaaccaaatctgaggaaattgagaagg
atgtacaagtcgtggaagctttatggaaaagatcaatctcttgctcaaaacaaagcatga
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