Rhinichthys klamathensis goyatoka (western speckled dace): 130102240
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Entry
130102240 CDS
T09701
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b
KO
K07206
tuberous sclerosis 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04140
Autophagy - animal
rkg04150
mTOR signaling pathway
rkg04218
Cellular senescence
rkg04910
Insulin signaling pathway
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130102240 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130102240 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
130102240 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130102240 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130102240 (tsc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
130102240
NCBI-ProteinID:
XP_056124187
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MSREQLSIGDLLPLLETSDLRQLDEIKGLINEHLSTDRGSVLLNGLVDYFLETNSAQAVH
ILSSVREPHDKHLFDKMNECMAKAPCRLPTLTLLGHVVRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLITLLPMIPQAGKHHLYEFFDIFGRLASWNLRNPGHIPEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMDTFEEVVKPMLEHVRIHPELVTGTKD
HELDPSRWKRFEIHDIVIECAKVSLDPKEAYCEEGYASMPEHFCAHLQQRPADCTASPYG
DFHSSYGSSSSAHYSTPRQPVVPPLALSSFSGNQPPYRSPTGTRRQNSSCEFNATYGVKD
SLWSPSSHCGMATPPSSRGMSPNPELSQSASYLSSRLYSTPAGGKVTPSSSTPAAASPPP
SFSDEFPPVSLPRSTASPPCKDGRPLDHTKPVLVRQEPVRELEKIGPETINHRDGRGENM
PMTLTELSVYMKEQEQMRIEKEREDAAITEELLKLTEEKQDLAGLRGFDSPFFNTTETLT
GTQEKPLPSSILCGLIRDPHNAISTPDKAEITPGDRGRVSRGPSQEHPWSFQPVFMPIEH
PTHSQLHRSSSAPEDEALKYGLCSPSPCKPPPLPYEALFDMALPRAASLFVGRKTTEIVQ
RVAFERFQRGDLSKQGEEECVEGVVSASPLEVLDRLVQQGGDAHDKVLKRLPLPSKSADW
THFGGSAPLDELQTLRSQLLLLHNQLLYERYKREQHAVRNRRLLRRIINATALEEQNNAM
KDQLNLQSVDILSLRESLQVEQQRYRQLWDDRETVVTRLHSQIRQLQQARDDYYTKNQEL
QSKLQECQKRIGEMEAELQKANNKVCHTGHLLNQLTVKLSSSESIQQQLSFLNKQLLLLG
EAHKLCVQELHQAGPDTSKEVQMLQMSWGKETECLKQNLLLQSQKLDAAQQRVAELETQI
SKKEHLIAEQKKFLEDVKAQAKGELQASESRYQAQRRVTLALQTELLQLYSRLETEGSSA
PAVALPAEGATEPRSSTEPSVIVVDGAVKTATKEDGKSSQSPRGNGSTLSPGQPKASPSP
ANSVNGNRDTPPPVLVEPPLHRPHSPLGPPGPMVPSDTPVTVGSYPSAKSFLGMRARELF
RNKSESQCDEDEAPPPRLTGLSQGLKTELCVEPTTKSTPISTAAQSFTLIASAKETQPDA
QRAKNRNTYGSRCPERPRQQPLRIMDYNESHQEHS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggaacagctcagcataggagacctgcttcctctgctggagacctctgacctc
cgccagctggatgagatcaagggccttatcaatgaacacctcagcacagatcgagggtcc
gtgctgctgaacggcttggtggattatttcctggagaccaactccgcccaggcagtgcac
atcctgtcctcagtgagggagccacacgataagcacctttttgataaaatgaatgaatgc
atggctaaagccccctgtcgcctgcccactctcactctactgggtcacgttgtccgtaag
cagccgtcttggatccacaagatcgctcgctatccgctgctgctatctctcctcaaatgc
ctcaagacagacacagatgttgtggttctaataactggagtcctggtgctcattacacta
ttacccatgattcctcaagctggcaagcaccatctctatgagttttttgatatctttggc
cgtctggcttcctggaatctgagaaacccaggacacataccggaggtttatctcatccac
ctgcacgcaagtgtctactcgctcttccaccggctgtatgggatgtacccctgcaatttt
gtgtcttacctgcgctcccattacagcatgaaggaaaacatggacacttttgaggaggtg
gtcaagcccatgcttgaacatgtcagaatacaccctgagttagtgaccggaaccaaggac
catgaactagaccccagccggtggaagagattcgagatccacgatatagttatagagtgt
gccaaagtctctctggatccgaaggaggcgtactgtgaagagggctatgccagcatgcct
gagcatttctgtgctcatctacaacaacgtccggctgattgcactgccagcccttacggt
gacttccacagtagctacggaagttcttcctcagctcattactccacccctcgtcagcct
gtcgtccctcccttggccctgtcctctttctcagggaatcagcccccctatcgcagcccc
actggaacccgtcggcagaactccagctgtgaatttaatgcaacatatggtgtaaaggat
tccctctggagcccctcctcccactgtggcatggccacacccccttcctcccgtgggatg
tcaccgaacccggaactgtcccagagtgcctcttacctatcgagccgcctctacagcaca
cccgcgggtggcaaagtcaccccatcatccagcacccctgcggccgcctcacctcctccc
agcttctccgatgagtttccccctgtgtctctgccacgcagtaccgctagcccaccatgc
aaggacggtagacctttagaccacaccaaacccgtcttggtcagacaggagccagtcaga
gagcttgagaaaattggacctgaaacgatcaatcacagagatggcagaggtgagaacatg
ccaatgaccctgaccgagctctccgtgtacatgaaggagcaagaacaaatgaggatcgag
aaagagcgggaggatgctgccatcacagaggagcttctgaagttaaccgaggagaagcaa
gatttagctggccttcgtggctttgactctccgtttttcaacaccacggagaccctgacc
ggcacacaagagaaacccctgccctcttctatcctctgcggcttgattagagaccctcac
aacgccatctcaacacctgacaaggctgagatcacacccggggacagaggcagagtgagt
agaggcccatcccaggagcatccctggtctttccagccagtgttcatgcccatcgaacac
ccaacgcacagccaactccatcggagctcttccgcaccggaggacgaggccctgaaatac
ggcctctgctcccctagcccgtgcaaaccgccacccctgccgtacgaggctctgtttgac
atggccctgcctcgggcggcctctctcttcgtagggaggaagaccacagagattgtgcag
cgagtagcctttgagaggttccagagaggtgatttgagcaagcaaggggaggaggagtgt
gtggagggggttgtgtctgcctcccccctggaggtgctggatcgcctcgtgcagcagggc
ggtgatgcccatgacaaagtgctaaagagattgcccctgccaagcaagtcagctgactgg
acacactttggaggttctgctcctctggacgagctgcagacactgcgcagtcagcttctg
ctgctccacaaccagctcctgtacgagcgctacaagcgagagcagcatgctgtacgtaac
cgacgtctgcttcggcgcatcatcaatgctaccgcgctcgaggagcagaacaacgccatg
aaggaccagctgaacctgcagagtgtggatatcctgtctctgagagaaagtctgcaggtg
gagcagcagagataccggcagctttgggacgaccgagagactgtagttacacgcctgcac
agccagattcgccaactacagcaggccagggatgactactacaccaaaaaccaagagtta
cagagtaagctacaagaatgccagaagcgaataggtgagatggaggcggagcttcagaag
gcgaataacaaggtgtgccacacgggacacctgctgaaccagctcactgtcaagttgtcg
tcgagtgaaagtattcaacagcagttgagttttctgaataagcagctgttgctgttggga
gaagctcataaactgtgtgttcaggagctgcatcaggctggaccggatactagcaaggag
gtgcagatgctgcagatgtcctgggggaaggagacagagtgtcttaagcagaatctgtta
cttcagagccaaaagctggatgctgctcagcagagagtggcggagctggagactcaaatc
tcgaagaaagagcatctgatcgcagaacaaaagaagtttcttgaagatgtcaaggctcag
gccaaaggggaactgcaggcttctgagagcagatatcaggcacagaggcgggtaactctg
gctctgcagactgagcttttgcagctttacagcaggctggaaacagaaggctcctcggcc
cctgctgtagccttaccggcagagggcgccactgagccccgcagttccaccgagcccagt
gtcatagtggtggacggcgcagtaaaaacagccaccaaagaggacggcaagtcatctcag
tctccgcgtggcaatggcagcactttatctccagggcagcccaaggccagcccttccccg
gccaactctgtaaacggcaatcgagacactcccccacctgtcctagtggaaccgcccctt
caccgtcctcattccccgctgggacccccaggacccatggtcccttctgacaccccagtc
actgtaggctcctaccccagcgccaagagctttctgggtatgcgggcaagagagctgttc
cggaacaaaagcgagagtcagtgtgacgaggatgaagccccgcctccacgtctcactggc
ctatcgcagggcctgaagactgagctctgcgtggagccgacaacaaagagtacgcccatc
tccactgctgcgcagagcttcacgctcatcgcatctgctaaagaaacccaacctgatgct
cagagagccaaaaaccgaaacacgtatggctcacgatgcccagagaggcccaggcagcaa
ccgttaaggatcatggactataacgaaagtcatcaggagcacagctaa
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