Rhinichthys klamathensis goyatoka (western speckled dace): 130102280
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Entry
130102280 CDS
T09701
Symbol
hpse
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00531
Glycosaminoglycan degradation
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130102280 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130102280 (hpse)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
130102280 (hpse)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Enzymes
130102280 (hpse)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
130102280
NCBI-ProteinID:
XP_056124246
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MKSAFTAVSTIFALILFRALCADVKIVISVEDVQSIRVDLDLSNVVRRVDERFLSVAIDA
SLIAEEKFMNLLNSPKLRTLAKALIPAFLRFGGTKQDFMKFNPRGRYFQARENSSSAVLG
NVCKILELPPLLENRLKQEWVLQSKTLLQEELEGKYKNTKFSEYAVDLLYAFANCSGLDL
IFGLNALLRTSENTWDSANAELLLKYCESREYVMSWELGNEPNSYEKKAGIRVDGYQLGQ
DFVHLHQILQESAIYNSTGLYGPDIGQPRDHRKDLLTGFLESGAEAITACTWHHYYVNGR
DASLEDFLDPHVLDTLATKINEVLETTESVSPGKKVWLGETSSAYGGGAFGLSDTFVAGF
MWLDKLGLAAKLGLDVVIRQVLIGSGTYHLVDDNLDPLPDYWLSLLYKRLVGPEVLKAEV
NTNSGQKKPIRVYLHCTNRKSTYYREGAVTLFALNLNKNEATIALPAHMANSTIEAFVLQ
SAEAGEQSLYSRSVKLNGQVLKMVDDRTLPPLEGRELPPGAHIKLPGFSFAFYVLTEARA
PVCK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgcattcacagcagtttccacgatattcgctcttattttgtttcgcgcattg
tgtgccgacgtcaaaatagtgatatcagtcgaagatgttcagtccatacgtgttgatctg
gatctgtccaatgtggtccgaagggtggacgaaaggtttctctctgtggctatagatgcg
agtttaatagccgaggagaagttcatgaacctactgaattcaccgaagttaagaaccctt
gccaaagccttgatcccagcgtttctgcgatttggaggtaccaaacaagattttatgaaa
ttcaacccacgcggaagatattttcaagcaagagaaaacagcagcagcgctgttctagga
aatgtatgcaagatacttgaattgcctccattgctggaaaataggttaaagcaagaatgg
gtcctacagtcaaagactttacttcaggaggaactagagggaaaatacaaaaatacgaaa
ttctctgaatatgctgtcgacctgctgtatgcctttgcaaactgctctggtttagacctc
atctttggtttgaatgctttgcttcgaaccagtgaaaacacatgggacagcgcgaatgca
gaactgctgttgaagtactgtgagtcgagagagtatgtgatgtcttgggagctggggaat
gagcccaacagttacgagaaaaaagctgggatcagagtggatgggtaccagctcggtcag
gattttgtccatttgcatcaaatccttcaggaatccgcgatctacaactcaacaggtcta
tatggaccagatattggtcagccacgagatcaccgcaaagatttgttaactgggtttttg
gagtctggagcagaggccattactgcatgcacctggcaccactattatgtgaatggcaga
gacgcatctttagaggatttccttgaccctcatgtgcttgatactctggcaacaaaaatt
aacgaggtcctcgagaccactgaatctgtttctccggggaagaaggtttggctgggagag
acaagctcggcatatggtggaggtgcctttggtctatcagacacatttgtagctggtttt
atgtggctggacaaactgggacttgctgctaagcttggtttggatgtcgttatcagacag
gtattaattggttccggcacgtaccatttagtggatgataacctagatccccttccagat
tattggctatcattgctatacaaaaggcttgttggtccagaagtcttaaaagcagaagtt
aatacgaattctggacaaaagaaaccaatacgggtataccttcactgcactaacagaaaa
agtacatattacagagaaggtgctgtgaccttatttgccttaaacctgaacaaaaatgaa
gccacaattgctctgcccgcccatatggccaacagcaccattgaagcatttgtgctacag
tcagctgaggccggtgaacagagcctttattccaggtcagtcaaattgaatgggcaagtg
ctgaagatggtggatgaccgaacacttcctccactggagggtcgtgagctgccgcctgga
gcacacattaagctgcctggcttctcatttgcattctatgttctgactgaagcacgagct
ccagtatgcaaatga
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