Rhinichthys klamathensis goyatoka (western speckled dace): 130102579
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Entry
130102579 CDS
T09701
Symbol
caprin1a
Name
(RefSeq) caprin-1a isoform X1
KO
K18743
caprin-1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130102579 (caprin1a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130102579 (caprin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
130102579
NCBI-ProteinID:
XP_056124508
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MPSVTTGDNAVHSSSPDLGSAPSDGLKQVLGVIDKKVRNMEKKKSKLDDYQTRKNKGERL
NQDQLEALSKAPEVAHNLDFARELQKNFLALNVEMQKTVKKATRREQLKREEAERKRLKA
VLEVQYLLEQLGEESVRQDLTQSSGEAPLLTESELTGLDEFYKLIGPERDSSVRLAEQFE
EASVHLWEVMEGRDKAVAGTTYKALKETLDKMLLSGYFDRTQTHQNGVCEEETGAAAAAA
ESSESEDRPAEPEGSAQEYTETIEVESTEFVNRQFVPETTYSSSDKEQGAEWNTSSQAVS
ALQQPQQPPAAMSPALVSSEPHTLNAVLPTPATDPVVRKQVVQDLMAQMQGTFNFMQDSM
LEFEGPPLDPAIVSAQPMKPAQMVCPPESRLPQHNALSVQPEHTQVPMVSAPKEAYSSTP
PLYQPPHNSEPRPQTDSIDPQQVSMPLSSEQPPTPSSQPQVFQPVSKPLHSGINVNAAPF
QSMQAVFNLNAPVPPTSEIDSQKISSQYQSGYGQGYSTQANLPAEQQEIPQEALQSVGPF
HSQDQGIPSAGGHQSAPQQPSGQGTGFGRPGQSFYSNRAMPRAGPRNPRGALNGYRGPSN
GFRGGYDGYRAPFPNTPNTGYGQTQFSTPRDYSNNTYQRDGYQQSFKRGATQGPRGCSRG
RGGSYRSSRGMGPMAAQQTS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagtgaccactggcgacaatgctgttcactcctccagtccggatttgggctct
gcgccatctgatggcctcaagcaagttcttggtgtgattgacaagaaggttcgcaacatg
gaaaagaaaaagagcaagctggatgattaccagacaaggaagaacaaaggagaacgcctc
aaccaggatcagctggaggctttatctaaagctccggaggtggctcacaacttggacttt
gcccgtgagttgcagaagaacttcctggctttaaatgtggagatgcagaaaacggtgaaa
aaggcgacacgacgggagcagttgaagagggaagaggcagagcgcaagagactgaaggca
gtgctggaggtgcagtacctgctggagcagctgggggaggagagtgtgaggcaggacttg
actcagtctagtggggaagcccccttgctaacagagtcagaactcacgggcctggacgag
ttctacaagctgattgggcctgagcgggactctagcgtaaggttggctgagcagtttgag
gaagcatccgtgcatttgtgggaggttatggaaggaagggataaagctgtggctggaacc
acatacaaagcccttaaggaaaccttggacaagatgctgctaagtgggtactttgatcgt
actcaaacacatcagaatggagtgtgtgaagaagagacgggggctgcggcagcagcagcg
gagtcatcagagagcgaggaccgccccgctgagccagagggatcagctcaagaatacaca
gaaactattgaggttgaatcaacagagtttgtaaacagacagttcgttccagaaaccacc
tactccagcagtgacaaagaacaaggagcagagtggaacacgagctctcaggcggtcagt
gcccttcagcaacctcagcagccccctgcagccatgagcccagctctggtcagctcagaa
ccacacacactgaacgccgtcctccctactcctgcaacagatcccgtggtccgaaagcag
gtggtacaagatctcatggctcaaatgcagggtaccttcaactttatgcaggactccatg
ctagagtttgagggaccgcctttagatcctgcaattgtgtcggcgcagcccatgaaacct
gctcagatggtctgtccaccagaatccagactcccccaacacaatgctctttctgtgcag
cctgaacacacgcaagtcccgatggtctcggctccaaaagaggcttactcctccacaccc
cctctctatcagccccctcataactctgagccccgaccacagacagactccattgacccc
cagcaggtttccatgcctctgtcgtctgagcagccccccaccccttcctctcagccccag
gtgtttcagcctgtctccaaaccccttcacagcggcatcaacgttaacgcagctccattc
cagtccatgcaagcggtgttcaatttgaatgctccagttcctccaaccagtgagatagac
tcacagaagatttctagccaatatcagagcggttacggtcaaggctacagcacacaggcc
aaccttccagctgagcagcaggaaatccctcaagaagccctgcagtcagttggccctttc
cattctcaagaccaaggtattccgtctgcagggggacaccagtctgcacctcagcagccc
tcggggcagggcacagggtttgggcggccaggtcagtccttttacagcaacagagcaatg
ccacgagctggacccagaaatcctagaggtgctttgaacggctaccgtggaccatcaaat
ggatttagaggtggatacgatggatatcgtgctccgttccccaacactcctaacaccgga
tatgggcaaactcagttcagcactccacgagattactccaacaacacctaccaacgggac
ggatatcagcaaagcttcaagcgaggagctacccagggacctcgaggttgctctcgagga
cgtgggggatcatatcggtccagcagaggaatgggtcccatggctgcccaacagaccagc
taa
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