Rhinichthys klamathensis goyatoka (western speckled dace): 130102654
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Entry
130102654 CDS
T09701
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130102654 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130102654 (poln)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130102654 (poln)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
130102654 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
130102654
NCBI-ProteinID:
XP_056124595
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MENYLCSSLNAAPLSAAAQSIIAALQFQYVHRADRSRATLSSRGFRLSQHQGRDDRNQEI
CTGKIRDLDLNNLAEDSNHFMLRDETSNERFALYYAGDIIKPNTQPHIPVAQGENSLCLF
HFNSVGSPQARPDVMTEEEIHKLTLGKRRWIQPASPIEKGPVGCNQHEATPVKKISFSQL
TFPTNNCHPASKEECKRIDNVDKQSKNGQIDQLWSCRSGLTENDNYDSVCEEISKEARAD
KAVFIQVQHNSFTSNAEKPTYKYQDLETSHCRQDNRNSELSAPVENCAYAKRCGSIFVFE
CEQHTPVRPGEILDSVREKEDSDSEQREITKSRTSSPKSDENTILMPVEERTGKMESTVH
PASVGVQHSIQPRSQAGEGESFPKHIRKWEPPGPLQEGPKIISSQELCDKTLRNQTFCHA
KVKGSVHLLKPKAPQSGVKRQRHPLRPQKQSKRQGCNKPNNFKLPNPSDPSLSGSKISYQ
MSSETDIKEDGTTATPRGAFSLISDPRVCDTGRLSQEDRECMLEEVGKAKALVVTMVYQD
GTIQLDPEQRLCPAVCGLLVLLKTDLDSEGLQDRPPERVLYLRLEQTPAWAQQDFIQKQD
AFTRELLLRMMCGTKLFVCFKAKDLLRTALRHFSRDLSWKQVLGCQVMDPQIAAWLLDPG
NSATCFQTLLSKHYTHPVPPTLEPVLGQAKVTQAISNLSLLHKLMVELHNKLQTQGLWQL
YSGIEQKMIPVLAAMESYKMHVDKEALKKTSEMLGSKLKQLEQEAHQAAGQKFLVSSSAQ
LRLILFEKLRLHELCENKKLPKTIKQQQSTSETALLQLQKLHPLPKIVLEYRQIHKIKTA
FVDGILSCMSKTFISSTWNQTSTVSGRLSAKHPNFQALPKQPLQITKKQCIQGKNSDVVT
VHPRAMFIPREGWTFLSADFCQVELRLLAHLSADPQLLRIFQNPEADAFTMLAAQWKGVS
EDTVSLEDREHAKRIVYSVVYGAGRERLSSILGVSAEEASRFQDSFLQTYREVPAFIQHI
IQHCHEHGFVKSIMGRRRSLPHIHSADWSLRNQAERQAVNFVLQGSAADLAKMAMIKICS
QVSSASYTARLVAQIHDELLFEVEISQLEQFAVLVKKTMESLQHIADLEVNISVPLKVSL
STGRSWGSMCEMNLPCTTTATSV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggagaactacctctgcagcagtctgaacgcagctcctctctctgcagctgcacagagc
atcatagcagcccttcagttccagtatgtgcacagagcagacagaagcagagctaccttg
agtagtagaggcttcagactgtctcagcatcagggcagagatgacagaaatcaagagatc
tgcacagggaaaatcagagacttggacttaaataatctggcagaagattcaaaccacttc
atgctaagggatgagaccagtaatgagaggtttgcactctactatgctggtgatatcata
aagcccaacacccagcctcatataccggtagcacagggagaaaacagtttatgcttgttc
cactttaatagcgtggggagccctcaggctagaccagacgttatgacagaagaagagatc
cataaactgaccttgggtaaaaggcggtggattcaaccagcaagccccattgaaaaaggc
ccagtaggttgtaatcaacatgaggctaccccagtgaagaagatcagctttagccagctt
acgttccctactaacaactgtcatccagcatccaaagaagagtgcaaaaggattgataat
gtggacaagcagagtaagaatggacagatagaccaattatggagctgtcgatcagggttg
acagagaacgataactatgattctgtttgtgaggaaatctcaaaagaggctagagctgac
aaagctgtgtttatacaagtgcagcataatagttttacatctaatgcagagaaaccaaca
tataagtatcaggatctggagaccagccattgccggcaagataatcgaaactctgaattg
tcagctccagtggaaaattgtgcttatgccaaaagatgtgggagcatctttgtctttgaa
tgtgagcaacacacacctgttaggccaggtgaaatactggactcagtgagggagaaagaa
gacagcgactcagaacaaagagagattactaagagcagaactagttctcccaagtcagat
gagaatacaatcctgatgcctgttgaagagagaactggaaagatggagtctacagtacac
cccgccagtgttggtgtgcagcacagcatccagccccggtctcaggctggtgagggggaa
tcttttccaaagcatattagaaaatgggaaccccctggtcccttacaggaaggtcctaag
atcatttcatcccaggagttgtgtgataagacacttagaaaccaaacattctgccatgca
aaagtaaagggctcagtgcatctcttaaaaccaaaagctccacagtctggtgtcaagagg
cagagacatcccctcagaccccagaaacaatctaagaggcaaggatgcaataaaccgaat
aacttcaaactccccaacccctccgatccaagtctgtcaggatccaaaataagctatcaa
atgtcttcagaaacagatataaaagaagatggaaccacagcaacccctagaggggctttt
agtttgatttctgatcccagggtgtgtgacacaggccgtctctcacaagaggatagagaa
tgcatgttagaggaggttggaaaagcgaaagcattagttgtcaccatggtataccaagat
ggcaccatacaactagacccagaacagaggctgtgccctgcagtgtgtggcctgctggtt
ttgctgaagactgatttggactcagagggactacaggacaggccaccagagagggtgcta
tacctcagactagagcagacaccagcctgggcccaacaagactttatacaaaaacaggat
gccttcaccagagagctgctgctgcgaatgatgtgtggcacaaagctgtttgtgtgcttt
aaagctaaagacctgcttcgcacagcattgagacactttagcagagacctgagctggaaa
caagttttggggtgtcaagtcatggatcctcagattgctgcgtggttgttagatcctggc
aactctgctacctgctttcagaccctgctttccaaacactacacacatccagttccgccc
acactggaacctgtgcttgggcaagccaaggtgactcaagcgatttcaaatttgtctctt
ctacacaagctaatggtggaactacataacaagcttcagactcaggggctgtggcagctc
tattctggcatagaacaaaagatgattccagttctggcagcaatggagagctataaaatg
catgtggacaaggaggccttgaaaaagacttcagagatgttggggtctaagctgaagcag
ttagagcaggaggctcaccaggccgcaggtcaaaagttcttggtatccagcagtgctcag
ctcagactgatcctcttcgagaagctgcgtttacatgaactttgtgagaataagaagctt
cccaaaacaatcaaacaacagcagtcaacatcagaaacagctctattacaactacagaag
ctgcatccactgcccaaaatcgtactggaatacagacagattcacaaaatcaagactgca
tttgtggatggcattttgtcttgtatgagcaagacattcatttcttccacatggaatcag
accagtacagtgagtggcagactgtctgccaaacatcctaattttcaagctcttccgaag
cagccactgcagatcactaagaaacagtgcatccaaggaaagaactctgatgtagtgact
gtgcacccacgtgccatgttcattccacgagagggttggactttcctctctgcagatttc
tgtcaggtggagttgcgtctcttggctcacctgtcagctgacccacagttactgagaatc
tttcagaaccctgaggcagacgcattcactatgctggcggcccaatggaagggtgtgagc
gaggacacagtgagtttggaggacagagagcatgccaagcgtatcgtctactctgtggtt
tatggagctggaagagagcggttatctagtattctgggtgtgagtgcagaggaggccagc
cgttttcaggactctttcctacagacgtacagagaggtgccggccttcattcagcacatc
atccagcactgccacgaacacggatttgtgaagtccataatgggaaggcgccgttccctc
cctcacattcactctgctgactggagccttcgaaaccaagcagagagacaggccgtcaac
tttgtactacagggctcagctgcagacctagccaaaatggccatgatcaaaatctgctct
caagtgtcttctgcctcttacactgccaggctggtagctcaaatccacgatgagctgctg
tttgaagtggagatctcacaattggaacagtttgctgtgctggtgaagaagaccatggaa
tctcttcagcacattgcagatttggaagtgaatatctctgtgcccctcaaagtctcactg
tccacaggacggtcatggggctcaatgtgcgaaatgaacctcccctgcaccactacagct
acttctgtctga
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