Rhinichthys klamathensis goyatoka (western speckled dace): 130102664
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Entry
130102664 CDS
T09701
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
rkg03015
mRNA surveillance pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130102664 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
130102664 (acin1b)
03015 mRNA surveillance pathway
130102664 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130102664 (acin1b)
03041 Spliceosome [BR:
rkg03041
]
130102664 (acin1b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130102664 (acin1b)
Spliceosome [BR:
rkg03041
]
Complex C
Other components
EJC/TREX
130102664 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
130102664
NCBI-ProteinID:
XP_056124621
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MAESEDVTLDGKPLHSLRVADLKTALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADEKQSSAGPEEDDHMS
KGSTSFLPEKHHIGSIHLSVNQAGGGGLPQDPGLMGSHRLDTGPVPVSQESPDTKAGRIW
HPSFLPGHEEVATPSPPRAVASLSVRVVGQPERQGLPIMMPRSQEREGTAPVEAGPAHSV
LQLSRSAGAAACSQVDSNDDDEDDDDDDSGDNDEWGPSSHGKKDLRAPPVHPPAAAAAPQ
RSRRKLQPPQHIPPQPQPIHQAPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEPAGI
AEDAAPGAGMVSPPSLKRQESSSSSRSSSPEPPSTRRPGPLSLLVRKMESEGVFGALKVG
MEGEGEMEVEVQEGGKPAAQDSAQQLLGSEVSISVPTMTPAQHDAQDSELEKEKDEEKEN
KKADETSAPFRLTSPTTFPPRRKPIFSEVPPPESLKSPSKPQVSVLTTGPKGSEDIAMEI
EASTAMAESKHKGVKQMKVLEKEAPKQSLKPAEASKKALKSPHATKEGEIDKKRESSLRE
KSPGRRTSSQSSSSDTDSESSSSRSSSSPSQEKSNPPSRKKDEKEKRRDVEEKKKAQSFR
EVKQEALSEPAGQVAMELEGRSHSESAMQQSDQQGAESSDSHPEESSTAKSFAARKISLS
SKTEIASSESEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQEAVVELH
PDESRLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMEDDDDEEEPKW
TGGEKEIHRKQESSPDASIETQEGDSKKVTPNDSLVRRSISQQKSGVSITIDDPIRTGRQ
LSPPRGKTSKIIHVCNLVRPFTLGQLKELLNRTGTLVEEGFWIDKIKSHCYVTYSTIEEA
AATREALHGVKWPASNPKVLRVDFCEQDELDFHKGIVSSDRVGHDPQASGRPAAHPPLPP
PNHEKEKDRERERDGGATAVRDQWAERERAMERRERTRSEREWDRDKVKDFGKEDRNDKT
RRSRSRDRRRRERGKSKEKRVEKKDKPEEPPVKLLDDLFHKTKAAPCIYWLPLTDEQATQ
RALERAERKKEREKRRQELQEEEDKKREEWRGRAKGRDREGGNTGVPGAGVVRRSTEGER
DRGKERERERGREAEQRRDGHRGRGSDSKPAGGSRRSQSRSSPSRDRRH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcgaggatgttacgttagacggcaaaccgcttcattcgcttcgtgtggcg
gatttaaaaaccgccctggagcaaagaggactcgccaaaagtggacagaaaaatgcactt
attaaaaggctgaaaggggctcttatgttggagaatctccaacgaacatcaacccatcac
attggtcttcagcccaactctcagattggggaggagatgagtcagaacagctttataaag
cagtacctggcaaaacagcaggagcttctccgacagagactggagagagaagcccgggag
gccaccgaggcagatgagaaacagagttctgctggccctgaggaggatgaccacatgtcg
aagggtagcacttcctttctcccagagaagcatcacatcggaagcattcatctgtctgta
aaccaggcgggtggaggagggttgccgcaggaccccgggttaatgggatcacacaggttg
gatacaggccctgttcctgtgtctcaagaatcacctgacactaaagctgggaggatctgg
catccttcgttcctccccggccacgaggaggtcgcaacaccctcccctccacgagcagtt
gcctccttgtctgtgcgcgtggttggacaaccagagcgtcaaggcctgccaatcatgatg
ccccgttcccaagagagagagggaacagcgccggttgaagcaggtcctgcccattcagtg
ttgcagctcagccgttctgcaggggccgcagcttgttctcaagttgatagcaatgatgat
gacgaggatgatgatgatgatgacagtggcgataatgatgaatggggcccttcctcacat
gggaaaaaggacctccgggctcctccggtacaccctccagctgcagctgcagccccccaa
agatcccgtcgaaagcttcagcccccacaacacatccctccccagcctcaaccaatccac
caggcgcctctgcagctccgtcaacccactcctcccccatcaccacctccagagctgtct
ttcccactacctgacactcccaaacagagcccacatgaccaagatgaaccagccggcata
gcagaagatgctgctccaggggcaggaatggtctctcctccatccctcaaaagacaggag
tccagctccagttctagatccagcagcccagaacccccatccacacggagacctggtccc
cttagcctgctggtccgaaaaatggagtctgagggcgtgtttggtgcactgaaggtaggg
atggaaggagaaggagaaatggaagttgaagtgcaggagggtggtaaaccagcagcacaa
gactccgctcagcagcttctcgggtcagaggtgtccatatcagtacccacaatgaccccg
gctcaacatgatgctcaagattctgagttggagaaagagaaagatgaggagaaagaaaat
aagaaagcagatgagacctctgcaccattccgtttgacatcacccacaactttcccacct
aggagaaaaccaattttctcagaggtcccaccacctgagtcacttaagtcaccctccaaa
cctcaggtgtcagtcctcaccacagggccaaagggctctgaagacattgctatggagata
gaggcctctacagcaatggctgaatcaaaacataagggggtcaaacaaatgaaggttctg
gagaaagaggcacctaaacagtcacttaaaccagcagaagcaagtaaaaaggccctaaaa
tcgccacacgctactaaagaaggagaaatagataaaaaaagagaaagttcactgagagaa
aaatctcctggacgacgcacatcaagtcagtcatcatcatctgacaccgattcagaatca
tcatcttctcgttcttcaagctctccttcacaggaaaagtctaacccacccagccgaaag
aaggatgagaaagagaaaagaagagatgttgaagaaaaaaagaaggctcagtctttcagg
gaggtaaagcaggaagctctctctgagcctgcaggccaagttgctatggagctggagggc
cgctcgcattcagagagtgctatgcaacagtctgaccaacagggggcagaatcaagcgac
tcccaccccgaggagagctccactgcaaaatcgtttgctgcccgaaagatctccctgagc
agtaaaaccgagattgcatcatccgagtcagagcctgtgggcggagccagcaggaagaga
aggtgggggtctagtacagcagtcactgccaaaaagccgtcaatcagcatcaccactgaa
tcgctgaagacactgattccagacatcaagcccctacaggaggcggtggtcgaactgcac
ccagacgagagccgtctctctgtggatgaggactcatccgggcctcgtgagcgagaggaa
ccagaagaggatcagggtctcaagatcagacgcacagtgacacagattgttccatctgat
ggacatgagaatgggcagaaagaaatggaggatgatgatgatgaagaagagccgaaatgg
acaggaggagagaaggaaatacataggaaacaggagagctcccctgatgctagcatagaa
acacaggaaggtgattccaagaaagtcactcccaatgattctttggtgcggcgctccatc
agtcagcagaaatcaggagtgtccataactattgacgaccccattaggacaggtcgccag
ctgtctcctcctcgtggaaaaacctccaaaatcatacacgtatgcaacctggtgcgaccc
ttcaccttagggcagctgaaggagttgttaaatcggactggtacattggtggaggagggt
ttctggatcgataagatcaaatctcactgctatgtcacatactccactatagaggaagca
gcggccactcgagaagcactgcatggtgtgaaatggcctgcgagtaatcccaaagtacta
cgggtggatttttgcgagcaggatgagttggacttccataaaggtatcgtgtccagtgac
cgtgtaggtcatgaccctcaagcctcaggccgccctgccgcacatccgccactcccacct
ccaaaccacgaaaaagagaaggaccgagaaagagagcgagacggaggggctacagctgtg
agagaccagtgggcagagagagaaagagcgatggagaggagagagaggactcgttctgag
cgggagtgggaccgggataaagtgaaagatttcggtaaggaagaccgaaacgacaaaacg
agaaggtctcgatcacgggaccgaagacgcagagagagaggcaagagcaaagagaagaga
gtggaaaagaaagataaaccagaagaacctcctgtaaaacttcttgatgacctgttccac
aaaactaaagcagctccctgtatatactggttacccctcacagatgaacaggcaacacag
agagctctggagcgtgctgagcgcaaaaaggagcgagagaagaggaggcaggaactccag
gaggaagaggacaaaaaacgagaagaatggaggggcagagcaaaaggccgtgacagagag
ggagggaacacaggagtaccaggagcaggtgttgtgagacgttcaactgagggagagaga
gacagaggcaaggaaagagagagagaaagaggcagagaggcagaacagaggagagatggc
cacagaggccgcggtagcgactccaaacctgcagggggcagcagacgctcacagagccgt
agcagcccctccagagacagacgccactga
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integrated database retrieval system
