Rhinichthys klamathensis goyatoka (western speckled dace): 130102784
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Entry
130102784 CDS
T09701
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130102784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130102784
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Serotonin (5-HT3)
130102784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Viral_Beta_CD
DUF3700
Motif
Other DBs
NCBI-GeneID:
130102784
NCBI-ProteinID:
XP_056124806
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSSFLVCVTCLLFLIDGVYLKQVCSKQDVLEYLNLTRGNEKFTTCRPALDWTHPTVVYVD
IYLYGILSMIEKSQIFVPLLWMSVSWNNERISWDPKEFCGIKNVTLPKEMLWKPDLYVLE
TAEKEDGPLNPFLFITHDGNVTMEDDHKIVSTCTMNVHKFPFDTQTCHITVSSINHSDKE
IKLVPASNSSKATQVARESILTQGEWVFLNISVSMEKDNYEGQTFDRIKYTISVKRMPLM
HFINFQLPILFFLILDLASFFIPDRGEKLCFKVTVLLGISVLLLILNDILPSKSHRCPLI
ATYVIVIFSFMLLSLLETILVIYLINMSSEQDTKWVQRQEDLNCETDKRKGDSSDHICYS
VVEAPLETLMLKEIYSKDKMNDMHLLQMILEELQTIKQTLPPHTLKAQTGQKYWLGMVIC
INRLFFVVYLISISLFLGFIFREWKVE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagttctttccttgtctgtgttacctgtctactttttctaatagatggagtgtacctt
aaacaagtatgcagtaagcaagatgtgctggaatatctaaatctcaccagaggcaatgag
aaattcacaacttgccgtcctgcactggactggacacaccccaccgtagtgtatgttgat
atttacctctacggcatcctttctatgattgaaaaatctcaaatctttgtacctctttta
tggatgtctgtgagctggaacaacgaacgaatctcttgggatcctaaggagttctgtggg
attaaaaatgtgactttaccaaaagagatgctttggaaaccagacctctatgttcttgag
actgcagagaaggaagatggaccactgaacccatttttgtttattactcatgatggaaat
gtgacaatggaggacgaccataaaattgtcagcacctgcacaatgaatgtgcacaaattt
ccttttgatactcaaacctgccatataacagtgtcttcaattaatcactcagataaagaa
ataaagctggttcctgcctccaattcatcaaaagcaacacaggtagctcgggaaagcata
ttaacccaaggagaatgggtattcttgaacatatctgtctcaatggaaaaagataattat
gagggccaaacatttgacaggataaagtacacgatttcagtcaaaaggatgcccctgatg
catttcatcaattttcagctaccgatattgtttttcctcattttggacctagcttctttt
ttcataccagatagaggggagaaactgtgcttcaaagtgacggtactactggggatctct
gtacttttgctcatcctaaatgacatcctgccatccaaatctcacagatgtcctctgatt
gctacgtatgtcattgtcatcttttccttcatgttgttgagtcttctggagacaattttg
gtgatatacttaataaatatgagctctgaacaagacactaagtgggttcagagacaagaa
gatctcaactgtgaaacagataaacgcaaaggagacagcagtgatcacatctgttattct
gtagtggaggctcctctagagactctgatgttgaaggaaatatacagcaaagacaaaatg
aatgacatgcacttattgcagatgattctggaagagcttcagactattaaacagactctt
cctccccatactttaaaagcccaaactggtcagaagtactggttaggaatggtcatatgc
attaacaggcttttctttgtggtttatctcatctcaatttctctctttcttggtttcata
tttcgagagtggaaagttgagtaa
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