Rhinichthys klamathensis goyatoka (western speckled dace): 130102791
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Entry
130102791 CDS
T09701
Symbol
thbs2b
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04518
Integrin signaling
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130102791 (thbs2b)
04518 Integrin signaling
130102791 (thbs2b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130102791 (thbs2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130102791 (thbs2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130102791 (thbs2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130102791 (thbs2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130102791 (thbs2b)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130102791 (thbs2b)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Opsonins
130102791 (thbs2b)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130102791 (thbs2b)
Exosomal proteins of colorectal cancer cells
130102791 (thbs2b)
Exosomal proteins of bladder cancer cells
130102791 (thbs2b)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130102791 (thbs2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
Laminin_G_3
cEGF
EGF
DUF3972
Motif
Other DBs
NCBI-GeneID:
130102791
NCBI-ProteinID:
XP_056124818
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MILRRCLRILALLLLFTSVKSQDAQLEDETVFDLFETSGITRKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSSALQQLLLQIQNNEGFILTATLRQDRTSRGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNIISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLSATGGHMFVAKGSTRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPVEAN
VVSESAEEVEVPSSIASNVIVQNTDVPATSSSEMMCERSCEELANLFQELKGLRVVVSNL
IDGLQKVTEENTAMKEALNKMQNPSEQSMCWQDGRMFEDKEDWIVDSCTKCTCQEGKVVC
RQITCPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNTCSGPSIQTRKCSLGKCDRRARQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQR
GGKDCEGDGRETQSCHADPCPIDGGWGPWSPWALCSATCGGGLKSRVRECNSPEQQHGGR
KCLGDSIENEVCNRQECPIDGCLSNPCFSGVECSTASDGSWECGPCPNGYRGNGTSCEDV
NECDMVSDLCHKVGGQQQCVNTDPGFHCLPCPPRYKGTQPYGMGVESAKINKQVCEPYNP
CKDNSHSCHKYAECIFLSHFSNPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLACGANA
TYHCKKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDD
VGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDIDGV
GDQCDNCPLVHNPQQTDVDNDLIGDQCDNNQDIDEDGHQNNMDNCPYIANANQADHDGDG
KGDACDFDDDNDGIPDDRDNCRLVPNKDQLDSDGDGRGDACENDFDNDNVPDIFDACPEN
SAISITDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGENLRNALWHTGNTKQQVRTLWHDPKNIGWKDYNAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRDN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgaagatgtctccgaattttggcccttttgcttctgttcacctctgtaaaa
tctcaagatgcgcaacttgaagatgagaccgtttttgacttgtttgaaaccagtgggatc
acacgcaagactatcggtgtgaagcttttcaagggtctggacagcgatgctccagcatac
cgcttcatccgtttcgaccagctcccttctgtcagttcctcagcgctacaacaacttctt
ttgcaaatacaaaacaatgaaggctttattctgacagccactctgcgccaggaccgcaca
tcccgtggcaccattcttgcactggaaggccctggcgagcgcaggcagtttgaggtcgtt
tcggatggccgaaccaacactctagatttggtgtactggtgggccgatggctcacgcaac
ataatctcttttgaggatgtagacctctcggattcgcaatggaagaatgtaacactctat
gtgcatggagagacggcaactttgtacattggttgtggactcattgatagcttcattctc
gatgaacctttctatgaacatctgagcgccacaggtggccatatgtttgtggccaaaggg
tccacccgagaaagccattttaggggtttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagtggaggcgaat
gtagtcagtgagagcgcagaggaggtggaagttccatcttcaattgcctccaatgtgatt
gtccagaatacagatgttccagcaaccagctcctcagaaatgatgtgtgaacgttcctgt
gaagaactggccaacctcttccaggagctcaagggtctcagagttgtcgttagcaacctc
atagatggtctgcagaaagtgacagaagaaaacacagcgatgaaggaagcactgaataag
atgcagaatccttcggagcagagtatgtgttggcaagatggccgtatgtttgaggacaaa
gaggactggattgtggatagttgcactaaatgtacctgccaagaaggaaaagttgtttgt
cgtcagatcacatgtcctcctgtggcatgtgccaatccatccttcatcgatggcgaatgc
tgtccagtgtgtcttccaatggacagtgaggacggctggtctccgtggtcagagtggact
cagtgcacagtcacgtgtgggagcggcactcaacagagggggcgctcttgtgatgacaca
agcaatacatgttctggaccctcgattcagacacgcaagtgcagtttgggaaaatgtgac
cgcagagctcgtcaggatggtggctggagcttatggtctccctggtcatcctgctcagtg
acatgtggggagggactgatcacacgtatccgtcactgcaatgctcctgttccacaaaga
ggtggcaaagactgtgaaggtgacggacgagagacacagagctgccacgcagacccctgt
ccgattgatggtggctggggtccatggtctccctgggcattgtgttcagctacatgtgga
gggggtctgaagagtcgtgttagagagtgtaacagccccgaacagcagcatggaggaagg
aagtgtcttggagactccattgaaaatgaagtatgcaaccgacaggagtgtccaattgat
ggctgtctttcgaacccttgcttctctggggttgagtgtagcacagcttctgatggatct
tgggagtgtggaccctgcccgaatggctaccgtggcaatggaacctcttgtgaagatgtc
aatgagtgtgatatggtttcagatctatgtcataaggtgggtggccaacagcaatgtgtg
aacacagaccctggattccactgtctcccctgccccccacgttacaaagggactcagccc
tacggcatgggagtggagtcagctaaaatcaacaaacaggtgtgtgaaccctacaacccc
tgtaaggacaacagccacagttgccacaagtatgctgaatgcatcttccttagtcacttt
agcaacccgatgtacaagtgtgagtgccgtattggttatgctggagacggaatcatctgt
ggagaggactttgatctggatggatggcccaaccaggatcttgcatgtggagcaaatgcc
acctaccattgcaaaaaggacaactgcccgactctacccaactctggtcaggaggacttt
gacaatgatgggcaaggagatgcttgtgataaagatgatgataacgatgaaattgtggat
gaaagggacaactgccccctgatgtataatcccaggcagtatgattatgacaaggatgat
gttggagaccgttgtgataactgcccgtatgaacacaaccctgctcagaccgacactgac
aacaatggggaaggagacgcctgttctattgatatggatggagatgagattctaaacgag
cgagacaactgccctctcatttacaacacagaccagaaagacacagatatagatggtgtc
ggagaccagtgtgataactgccctttagtccacaacccacaacagacggatgtagataat
gatctaattggagaccagtgtgataacaaccaggacatagatgaagatggccatcagaat
aacatggataactgcccatacatagccaatgctaaccaagccgaccacgacggagatggg
aaaggagatgcttgtgattttgacgatgataacgatggcattcctgatgaccgtgataac
tgcagactagttcccaacaaggaccaactggactctgatggtgatggtcgtggtgacgcc
tgtgagaatgactttgataatgacaatgtcccggatatctttgacgcgtgcccggaaaac
agcgccatcagtatcacagacttccggaagtttcaaatggttcacctcgaccccaaggga
accacgcagattgatcccaactgggtggtccgaaaccagggcaaagagcttgtgcagact
gccaactccgaccctggcattgcagtgggctttgatgagttcagtgctgtggatttcagc
gggaccttctatgtgaatacagacagggatgatgactatgcaggttttgtgtttggatac
cagtctagccgacgtttttacgtagtaatgtggaaacagatcacgcagacgtactgggaa
gacaagccgtcaaaggcgtttggcatctctggcgtctctctcaaggtggtcaactccacc
acaggcactggggaaaatctacgcaatgcattatggcacacaggcaacaccaagcaacag
gtgcgcactctgtggcatgacccgaagaatatcggttggaaagactataatgcctaccgc
tggcatctcatccacagaccgaagactggcttcattagggttgttgtatatgaaggcaag
cagatcatggcagactcaggtcccatttatgacaagacgtttgcaggaggaagactcggg
ttattcgttttctcccaggaggccgtcttcttctctgacctcaaatatgaatgcagagat
aattga
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integrated database retrieval system
