Rhinichthys klamathensis goyatoka (western speckled dace): 130102902
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Entry
130102902 CDS
T09701
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130102902 (lingo2b)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130102902 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_5
Ig_2
LRR_RPS2
V-set
LRRNT
LRR_9
C2-set_2
Ig_C17orf99
Ig_6
Motif
Other DBs
NCBI-GeneID:
130102902
NCBI-ProteinID:
XP_056125011
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MLFSPFSCALGLSLLPLLLFQCPVHACPARCECSVPTRSVSCHRRRLVQVPEGIPIETRS
LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPGSFRTQPRLRSLRLRSNQLTLLP
RGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRS
LTLQHCNLSSVPTHALAHLHGLNTLRLRDLGIAELQAHAFKGLPRLKHLEVDRWPLLEGF
PTSTLQGLNLSTLSITHTNLTSVPVVTHLLYLTHLNLSYSRIRVLPAGWLRGMDRLEVVR
VRQANLLSVEPQAFQGASSLRILDLCYNRLSTLERSVFPASVALQSLLIGQNPLVCDCRL
RWLLEKTPPLLYGDVQPECSAPAPLAGKPLRDLIEPQISRYVICTKPRVISMATYPSQAE
EGQRAWLYCSADGAPPPSVSWLTPHRRHITTKSTGRVVVHTNGSLEFRMAEPQDSGMYVC
VASNPAGNATLSVMHAVKSSGIRDRALYANRSFLFDPDYNNSLINGTEEYTIRVVLDITT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctctccgttctcttgtgctctggggctctccctcctgccactcctcctgttt
cagtgccccgtccatgcctgccctgcccgctgtgagtgctctgtgcccacgcgatctgtg
tcatgccatcgcaggcggttagtgcaggtgcctgagggcatcccgatagaaacaaggtcc
ttggacctcagtaaaaaccggctgcgcattgtgacgccacagaacttctcctcgctgcta
ctgctagaggagctggatctcagcaacaacctgttgtcatctgtggaaccgggcagcttt
cgcactcagccgcggctacgctctctccggctgcgcagcaatcagctgaccctgctgccg
cgcggggcgctagctggcctcagcgagctcactctgctggatgtcagtcaaaaccgtctt
gttattctgctggactacggctttgaagagcagaggaggctgcgggtactagagctgagt
gataatgagctagtgtttattgccccacgggcgttcagtggcctggcgtccctgcgctct
ctgacgctgcagcactgcaacctgagctcagtgcccacacatgctctcgcacatctgcat
ggcctgaacaccctgcggttgcgggacttgggcatcgcagagcttcaggcacacgccttt
aagggtctgccgcgactaaaacacctggaagtggaccgctggcctttgttagaggggttt
ccaacctccactttgcaggggctgaacctcagcacactgtccattacccacaccaacttg
acgtctgtgccagttgtgacgcatctgttgtatctaacacatctcaacctgtcttacagc
cgtatacgggtcctgccagcagggtggttgcggggaatggaccgtctggaagttgtacgt
gtgcgacaggctaacctgctcagtgtggaacctcaagcctttcaaggagcctcctcgctg
cgtattcttgacctttgttacaaccgtctctccacacttgagaggagcgttttccctgct
tccgtagccctgcagagtcttctgattggtcagaacccattagtgtgtgactgtcgttta
cgctggctcctggagaagactccacctttgctgtacggggatgttcaacctgaatgcagt
gctcctgcccccttggctgggaagcctcttagggacctgatagaacctcaaatctctcgc
tatgttatctgcaccaaacccagggtcatctccatggcaacctacccgtcacaggcagaa
gaagggcagagagcttggctatattgcagtgcggatggggctccacctccctctgtgtca
tggctgacaccgcatagacggcacattaccacaaagagtacgggaagagtggtggtccac
accaatggctcactagagttccgcatggcagagcctcaggatagcggcatgtatgtgtgt
gtggcatcgaacccagcgggcaatgctactctgtctgtaatgcacgcagttaaaagctcg
ggaatcagggacagagccctttatgccaaccgaagctttctttttgaccccgactacaac
aactccttgattaatggcacagaggagtacaccatcagagtagtgctggatatcaccacc
atcctggtctccacagcaatgggctgcctcagcttcctgggcgtcgttttgttctgtttc
ttgttgttgtttgcatggagccgtggcaaagggaaacacagaggaagcgtggacattcaa
tatgtcccacgaaagaggaaaggtgcaaactcagaacttacagaaacaagcgggcccaga
cgagtcaacatgaagatgatctga
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