Rhinichthys klamathensis goyatoka (western speckled dace): 130102914
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Entry
130102914 CDS
T09701
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04080
Neuroactive ligand-receptor interaction
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130102914 (gabrb1)
04082 Neuroactive ligand signaling
130102914 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130102914 (gabrb1)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
GABA-A
130102914 (gabrb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130102914
NCBI-ProteinID:
XP_056125023
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All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MLIARDHWRAGILCLFMLVALTLGRSPPANSVNEQSNMSYVKVTVDKLLKGYDIRLRPDF
GGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQL
WVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT
LEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSIIDYKTLSKKAVFATGSYPRLSLSF
KLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLRKKVAEKAAKSNNEKSNKV
QVDVHGHIPLTNLDLRLSGAEMLGALGDPRNTMFSYDSASIQYRKPLTSRDLYGRPTASI
ERPMARKKSHLRRRAAQLKVKIPDLTDVNSIDKWSRVIFPITYTFFNLVYWLYYVH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcgggatcactggcgcgcggggatcttgtgtctcttcatgctcgtggct
ttgacgcttggccgtagcccgccagcgaacagtgtgaatgaacagagcaacatgtcatac
gtcaaagtcaccgtggataaacttctcaaaggctacgacatccgtctcaggcctgacttc
ggaggtcctccggttgatgttggtatgagtattgacatctctagtatcgacatggtgtca
gaagtgaacatggactataccatcaccatgtatttccagcagtcctggcgcgataagcgt
ctgtcctacactgggatccctctaaatcttactttggataaccgagtggctgatcaactc
tgggtgcctgatacttacttcataaatgacaagaaatcttttgttcatggggtcactgtg
aagaaccgcatgattcgtctacatcctgatgggactgtgctctacggcctcaggataact
accacagctgcttgtatgatggatttgcgcagatacccgctggatgagcagaactgcacg
ctggagattgaaagttatggctacactacagatgacattgagttctactggcaaggagga
agttcagtgacgggggtggacaacattgagctgccgcaattctctattattgattataaa
acactgtctaagaaagctgtgtttgccacagggtcgtatcctcgtctgtctctcagtttt
aaactgaagagaaacattggatatttcatcctgcagacctacatgccttcaacactgatc
accatcctgtcctgggtctccttctggatcaactatgatgcttcagctgcaagagttgca
ctaggaatcaccaccgttctgactatgactacaatcaacactcatcttagggagacttta
cctaagatcccttatgtgaaggccatagatatctatctgatgggctgctttgtctttgtg
ttcctggccttgctcgagtatgctttcgtcaactacatattcttcggccgtggtccacat
ttacggaagaaagtggcagaaaaagctgcaaaaagcaacaatgagaagagtaacaaagtt
caggttgatgtccatggacacattcccctgacaaaccttgatctgcgccttagtggggca
gagatgttaggtgctcttggggacccgaggaacaccatgttctcttatgatagtgccagc
atccaataccgtaagccccttacaagtcgggacctctatggacggcccactgcctctatc
gagaggccaatggcacgaaaaaagagtcatcttaggaggcgagccgctcagctgaaggtg
aagattccagacctgacagatgtaaactccattgacaagtggtcacgtgtcatttttcca
atcacctacaccttctttaacttagtatactggctgtattatgtccactaa
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