Rhinichthys klamathensis goyatoka (western speckled dace): 130102956
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Entry
130102956 CDS
T09701
Symbol
hnrnpub
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130102956 (hnrnpub)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130102956 (hnrnpub)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
hnRNP proteins
130102956 (hnrnpub)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
AAA_18
SAP_new25
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
130102956
NCBI-ProteinID:
XP_056125073
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MSEINVKKLKVNELKDELKKRQLSDKGLKAELMERLQAALDAEAQAEEEDAVAPEAPEEK
EADGNGVAVKQGCTGEEPEGESMQAEEQNGDKGDAAVVGDGQDDEMGEEEEDGDAGVEMD
KAFEEDDEEEDDDDIIDKIDDEDGEPQSHQLEGDADKDISADQKNKKGVKRRREEHGRGY
FEFIEESKYSRAKSPLPPLEEEDEEFDDTLVCLDPYNCDLHFKVSRDRYSASSLTMESFA
YLWAGGRASYGVNKGKACFEMKITEKIPVKHLNSKNMDFHDVHIGWSLANGSLLLGEEEH
SYSYSGKGKKTSNCVTEDYGESFDENDVIGCFINFEADEVEISFSKNGKDLDVAFKVNKE
TLAGQTLFPHVLCHNCAVEFNFGQNETPFFPQVEGFTFLQQIPVDVRIRGPKGPETKKDC
EVIVMVGLPGSGKTAWVKKNVEENPGKFNILSTNTILEKMMIDSMKRQNKDTAKLSAISQ
RAPLFLGKFIEIAARKKRNYILDQTNVSAPAQRRKMCLFAGFQRKAVVVFPTDEALKERA
QKKAETDGKDVPEHAVLKMKGIYTLPEVGDCFSEVTYVELQKEEAVKLLEQYKEESKSAL
PPEKKVNQGTLTPRKGGGRGRGPKNQFSRGGGPGPRGGRGGFQPRGNFRGLPVPPRVGGF
NRHPRGYMPPPPPPPVFRGGFHSRGNFSRGGGGGMPSRGMSPRGGHMRGGHMRGNMGSRG
GAMSRGGPANRGNMHRGGGPNHRGPFQQKFRGRGGHQQNRGGFGNKNGSFAQTFNQSWQQ
GFWNQKPWNQQYHPGYY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcaacgtaaaaaagcttaaggtgaacgagttgaaggacgagctcaagaag
cgtcagctctccgacaaggggttgaaggccgagcttatggagcggctgcaggccgcgctc
gatgcagaggcccaggccgaagaggaagacgctgtcgcgccagaagcaccagaagaaaag
gaggccgatggaaacggtgttgcagtcaaacaaggctgcacgggtgaagagccagagggc
gagagcatgcaggccgaggagcaaaatggagacaagggtgatgccgctgttgtgggtgat
ggtcaggacgacgaaatgggtgaagaggaggaggatggggacgccggcgtggaaatggac
aaagccttcgaagaagatgatgaggaggaggacgacgacgatatcattgacaaaatcgac
gatgaagacggtgagcctcaatctcatcaattagagggggatgcggacaaagacatcagt
gctgatcagaagaataagaagggtgttaagagacgccgagaggaacatggaaggggctac
tttgaatttattgaagaaagcaaatacagccgggctaagtctcccctgccacctctggag
gaagaggatgaagagtttgacgacacactggtctgcctggatccctacaattgcgacctt
catttcaaagtctctcgagaccgatacagcgcctcgtccctcaccatggagagttttgct
tacctttgggcaggtggccgtgcctcctatggagtaaacaagggcaaagcctgcttcgaa
atgaagatcactgagaaaatcccagtcaagcatttaaacagtaaaaacatggactttcat
gatgtccatattggctggtccctggctaatggaagtcttttgctgggtgaggaggagcat
tcctactcctattcgggcaaagggaagaagacttcaaactgtgtgactgaagactacggg
gagagttttgatgaaaatgatgtcatcggctgcttcattaattttgaagctgatgaagtg
gagatttcattttccaaaaatggcaaggaccttgatgtggctttcaaggtcaataaggag
accttggccggacaaactctgttcccccatgttctttgccacaactgtgctgttgagttc
aatttcggtcagaacgagacgccattcttccctcaggtggagggcttcaccttcctgcag
caaattcctgtggatgtgcgtatcagaggacctaagggacctgagaccaagaaagattgc
gaggtgattgtcatggtcggccttcctggatctggaaaaactgcttgggtaaagaaaaac
gttgaagagaaccctgggaagttcaacatcctcagcaccaacactattttggagaagatg
atgattgacagcatgaagaggcaaaacaaagacacagcaaagctctcagccatctctcag
cgtgctcctttgttcctgggcaagtttattgaaattgctgcccgcaaaaagagaaactat
attttggatcagactaatgtctctgcaccggcccagagaaggaagatgtgtctgtttgct
ggcttccaacgcaaagctgtagtggtcttccctacagacgaggcccttaaggagagagct
cagaagaaagcggaaaccgacggcaaagatgtacccgagcacgccgttctaaaaatgaaa
ggtatctacacattgccagaagtaggagactgcttctcagaggtcacctatgtggaactg
cagaaggaggaggccgtcaagctcttggagcagtacaaggaagagagtaagagtgctttg
ccaccagagaagaaagtcaaccagggtaccttgacccccagaaaggggggtggacgaggc
agagggcctaagaaccagttcagtagaggtggtggtccaggaccacgtggaggcagaggt
ggattccagccccgtggaaactttagaggattaccagtaccacctcgtgttggcggtttt
aatcgtcacccacgcggctacatgccgcctccaccaccaccacctgtcttccgaggcggg
ttccatagtcgaggcaacttcagcagaggtggaggcggtgggatgcccagccggggaatg
tctcccagaggtgggcacatgaggggcgggcacatgaggggcaacatgggcagcagaggt
ggagcgatgagccgtggagggcctgcaaacagaggtaacatgcaccgcggcggtggaccc
aaccacagaggaccgtttcagcagaagttccgcggcagaggaggccaccagcagaatcgt
gggggttttggcaacaaaaacgggtcttttgcccaaacctttaaccagagttggcaacaa
gggttctggaaccagaagccatggaatcaacagtaccacccaggatattactaa
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