Rhinichthys klamathensis goyatoka (western speckled dace): 130102996
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Entry
130102996 CDS
T09701
Symbol
snx9b
Name
(RefSeq) sorting nexin-9b isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130102996 (snx9b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130102996 (snx9b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130102996 (snx9b)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
130102996 (snx9b)
Macropinocytosis
Sorting nexins
130102996 (snx9b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130102996 (snx9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_1
SH3_2
SH3_9
Vps5
Snx8_BAR_dom
Motif
Other DBs
NCBI-GeneID:
130102996
NCBI-ProteinID:
XP_056125145
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MESKAQVLYDFSAEPGNNELSVREGETITITNQNIGGGWIEARNSRGDVGLVPEDYLELN
PAQPFTSGGNAAALDLSFFDSHVPTPSTAASTAPVDVVQPETPVAPVTPGFSSTSPDETS
NGNDPWAAFDNNASGGVSNNWPAQPEGTETGKTSSNAWNSGGHGHPQAYQGPGAEDDEWD
EEWDDVKSSGGYAESEAGEGGAMNRGGAHGSSMKIALNKFPGFSKSGPELYLLSKQAAKG
TKLPIYIGEVGPVWAYPDYQLDCVVADPKKGTKMYGLKSYIEYQVTPTTTNKPVNHRYKH
FDWLYERLLDKFGSAIPIPCLPDKQVTGRFEEEFIKMRMERLQAWMSRMCRHPVVSCSDV
FQLFLSYKDEKDWKTGKRKAEKDETVGVMVFSTIEPEGLPDLDMVEVEQKCEQFNRFTKT
MDDGVKDLLTIGNEHWKRCTGPLPKEYQRIGKAFQNLSSVFISSGYQGEAALTDAMTAAG
KTYEEIAQMVAEQPRKDLHFLMETNNEYKGLLGCFPDTIGVHKAAIEKVKEGDKLVAAGK
ISPSDKTSMSKRASTMSYALQAEMNHFHSNRIYDYNRVMQQYLEEQVKFYEMIAEKLRHA
HSRFTTM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaaggcacaggttttatatgatttctcggcagagcctgggaataatgagctg
tcggtccgagagggtgagacaatcacaataaccaatcagaacattggaggaggatggatc
gaggcaaggaactctagaggagatgtcggattagtaccagaggactatttagagcttaac
ccggctcaaccttttacttctggaggaaatgcagccgccctcgatctctcgttctttgac
agtcacgtgccgaccccatccactgcagccagcactgcaccggtggatgtagttcagccg
gaaaccccagtcgccccagttaccccaggcttctcttccacctcaccagatgagacaagt
aatggtaatgatccatgggcagcgtttgacaataatgcctctgggggggtttctaataac
tggccagctcagcctgagggcacagagacggggaaaaccagcagcaatgcgtggaattct
ggaggacacggacacccgcaggcttaccagggtccaggtgcagaagacgatgaatgggac
gaggagtgggatgatgtaaagtcatcgggtggttatgctgaatctgaggctggagaaggt
ggcgctatgaacagaggtggagctcatggttcatccatgaaaattgccctcaataaattc
cctggcttctccaaatcaggtcctgagttgtacctgctgtccaaacaagccgctaaagga
accaagttgcccatttatattggagaagttgggccagtgtgggcgtatccagactatcag
ctggactgtgttgtcgctgaccctaaaaagggcaccaaaatgtacggcctcaagagttat
atcgagtaccaagtcacgcctaccaccacaaacaagcctgtcaatcacagatacaagcac
ttcgattggttatatgaaaggcttttggataaatttgggtcggcgattccaatcccctgc
ttgcctgataaacaggtgacaggcagatttgaggaagagtttataaaaatgcgtatggag
aggcttcaggcttggatgtcgcgaatgtgccggcatccggttgtctcctgcagtgacgtc
ttccagctgtttctctcctacaaagatgagaaggactggaaaacgggaaagagaaaagca
gaaaaagacgagactgtcggagtcatggtcttctccacgatagagcctgagggactgcca
gaccttgacatggttgaagtagagcagaaatgtgagcagttcaaccgtttcaccaagacg
atggacgacggtgtgaaagacttgctgaccataggaaatgaacactggaaacgctgcaca
ggcccccttccaaaggaatatcaacgcattggcaaagctttccaaaacctgtcgtccgtg
ttcatcagcagtggatatcaaggagaggctgcgctcacagacgcgatgacggcagcaggg
aagacctacgaggagatcgctcagatggtggcagagcagcctaggaaagaccttcacttc
ctcatggaaaccaacaatgagtacaaaggtctgctgggatgctttcctgacactattgga
gttcacaaggctgccatagagaaggtcaaggaaggcgataaactagtggccgccggtaaa
atcagcccctcagataagacctccatgtctaaacgtgccagcaccatgtcatacgctctg
caagcggagatgaaccacttccatagcaaccgtatctatgactacaacagggtgatgcag
cagtacctggaggagcaagtcaaattctatgagatgattgcagagaaactacgacacgct
cacagtcggttcactacgatgtaa
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