Rhinichthys klamathensis goyatoka (western speckled dace): 130103012
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Entry
130103012 CDS
T09701
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03410
Base excision repair
rkg04210
Apoptosis
rkg04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130103012 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130103012 (parp1)
04217 Necroptosis
130103012 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130103012 (parp1)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130103012 (parp1)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130103012 (parp1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
130103012 (parp1)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130103012 (parp1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130103012 (parp1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130103012 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
130103012
NCBI-ProteinID:
XP_056125169
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSPSDISGFTDLRWDDQEKVKKAVENGGATGGKGEQKGAAKGEKILNDFAVEYAKS
NRSTCKGCDQKIEKDYIRVSKKSVDPEKPQLGLIDRWYHTSCFVSRREELLFKPEYSAAQ
LKGFGALRDEDKEELKKRLPAVKNEGKRKTDDVDGGVSKKQKKENEKLELKLKEQSQLIW
GIKDKLKKFCSINDMKELLIANKQEIPSGESNVVDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPTEFSDIPFLKKFKFKRQDRLFPKDAPPAAP
TPLSATVTSAVPSMSTSSSNNLSEVPADKPLTGLKLLAVGKLSKNKDELKNAVEELGGKI
TGTANKSALCISSKKEIEKMSKKMEEVRDAGVRVVAEDFLTDIKESGKALQELISLHSIS
PWGAEVKVEAQAASAASKSTGAHSSKSTGRVKEEKAESKSKKMKLTVKGGAAVDPASGLE
DCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFYDKNSAMDNFCSVYEEKTGNSWASRNFTKHPNKFYPLEIDYGQDEEAVKLLTASAG
SKSKLAKPIQDLIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAV
ADSSSEALILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEVAYSLLRG
GVEDNKKDPIDINYEKLKTKIEVVDKSSNEAELILQYVKNTHAATHNTYTLDVEEIFKID
REGEYQRFRPFKELPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQADPVGLLLLGEVALGNMHELKKASHVTKLPKGKHSVKGLGRTAPDPIA
TVSLNGVDVPLGKGVNTNIDDTSLLYNEYIVYDIAQVNLKYLLKIRFNYQSSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcacaggacgacaagctctacaaagccgaatatgcgaaaagtggacgcgcc
tcttgcaagaaatgcaaagaaaacattgctaaggactcgctgagaatggccattatggtg
cagtctcccatgtttgatggcaaagtgcctcactggcaccatttttcctgcttttggctc
cgggctgcagtacagtcaccctctgacatatctggatttactgacctgcgctgggatgac
caggagaaagtgaagaaagccgttgagaatggaggtgctactggagggaaaggtgagcag
aagggagcagctaaaggggaaaagatactgaatgactttgcagtggagtacgccaaatcc
aacagaagcacctgcaagggatgtgatcaaaagattgaaaaggactacatccgtgtgtca
aagaagtcagtggacccagagaaacctcagcttggtctgatagatcgctggtaccacact
agctgctttgtgagccggcgtgaggaactattgtttaaaccagagtacagtgccgcccag
ctcaaaggtttcggagctctacgagatgaagacaaggaggagctgaagaaaagacttcct
gcagtgaagaatgaagggaagagaaagacagatgatgttgatggaggagtctctaagaaa
cagaagaaagaaaatgaaaaactggagctgaaactgaaggagcaaagccagctgatctgg
ggaattaaagacaagctaaagaagttctgctccatcaatgacatgaaggaactgcttatt
gctaacaaacaggaaattccctctggggagtcaaatgttgtggaccggctatcagattgc
atggcgtttgggtccctaaagccttgtgagacttgcaaagggcaacttgtgtttaagagt
gatgcatactactgtactggagacatctctgcatggaccaagtgtgtattcaagactcag
acacctgatcgcaaagactgggtcactcctacggagttcagtgatattcccttcctgaag
aagtttaagttcaaacggcaggaccgtttgtttcccaaagatgctcctcctgcggccccc
acccccttgtctgctactgtgacctcagccgtcccgagcatgtccacttcctccagtaac
aacctctcagaggtgcctgcagataagcctctgacaggactgaagctgctggctgtggga
aaactaagcaagaacaaagatgagctgaaaaatgcagtggaagaactgggaggaaaaatc
acaggcactgccaacaaatctgctctctgcatcagcagcaagaaggagattgaaaaaatg
agtaagaagatggaggaggtgagggacgcaggtgtgcgtgtggtggcagaggacttcctc
actgacatcaaggagtcgggcaaggccctccaggagctcatctccctgcacagcatctcc
ccttggggtgctgaagttaaagtcgaggcccaggctgcaagcgcggcctccaaatccact
ggagctcattcctcaaagagtaccggcagagtcaaagaggaaaaagctgaaagcaaatca
aagaaaatgaaactgacagtgaaaggaggggcagccgtagatcctgcctcaggtctggaa
gactgtgctcacgttctggatcagaatgggaagatttacagcgccacactgggtctcgtg
gacattgttagagggacaaattcatattacaaattacagctgctggaggatgacgtccag
aaacgatactgggtgttcaggtcatggggtcgagtcggcaccaccattgggggaaacaaa
ctggacaagttttacgataagaactctgcaatggataatttttgcagtgtgtatgaggaa
aagacagggaattcctgggcctcaagaaacttcacaaaacaccccaataagttttaccct
cttgagattgactacggacaggatgaggaggctgtaaagttgttgactgcaagcgcaggc
tccaaatccaagttggccaaacccatccaagacctcatccgaacgatctttgatgtagag
agcatgaagaaagccatggttgagtttgagattgacttgcagaagatgcctttgggaaaa
ctaagcaagcgacagatccaaagtgcctattcccttctgagcgaggtccaacaggctgtg
gcagatagctcttcagaagcactgatcttagacctgtccaatcgcttctacacactaata
cctcatgacttcggcatgaagaaaccaccgctgttgagtaacgtggattacatacagcaa
aaggtgcagatgctggacaacctgttggacatcgaggtggcctacagcctgctacgggga
ggagtggaggacaataagaaagatcccattgacattaactatgagaaacttaaaaccaaa
attgaggtggtcgacaagtcatcaaatgaggctgagcttatactacaatatgtgaagaac
acacacgctgctactcacaacacctacacactggatgttgaggagatctttaagatcgac
agggagggtgagtaccagcgtttccgccccttcaaagaattacccaaccgacagctgttg
tggcacggctcccgcgccaccaactacgcgggtatcctgtctcagggtctacgtatcgct
cctcctgaggctccagtgacaggttacatgtttggcaaaggcgtttactttgctgacatg
gtgtcgaagagtgcgaactactgccacacgtcccaggctgaccctgttggcctccttctg
ttaggagaggttgcccttggaaacatgcatgaactgaagaaagcctcgcacgttacaaag
ttaccaaagggtaaacacagtgtaaaaggtttgggaagaactgctccggacccaatagct
actgtatctctgaatggagtggacgttccgctgggcaaaggcgtcaacacaaacattgat
gacacaagtctgctctacaacgagtacattgtgtatgatattgctcaggttaacctgaaa
tacctgctgaagattcgcttcaactatcaatcctctctctggtga
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