Rhinichthys klamathensis goyatoka (western speckled dace): 130103021
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Entry
130103021 CDS
T09701
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130103021 (prdm1c)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130103021 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-C2H2_15
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
130103021
NCBI-ProteinID:
XP_056125178
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MPSKTLASTADESIAVQTEESVDVTRSCHVKDQCEMDFDEWKETRAQTPLPRNLRFTHHN
QKVLGVFTREVIPVGTRFGPLQGEHLHPEDISANINRKHIWMIFSEGRLHHFLSCEDESD
SNWMCFVNSAPSPWQQNLAGFQIGMQVYFYAVKDLMPGEELLVGRSLEYKRPMSTSLRTP
CLKQPPPTHPHSQDKNQVMKRKKGYTVTEILDLNPWTDHHIQTPLITQSKYGEKVTRDLQ
NPKLPPSLMTNSISDIPLNVGGHVYTPAIPQSAMPSNATDPSPGEVSNVDDTTAKRVSSS
SVTHVTESQKKQTAGYKALPYPLQRQNGKIQYECNVCGKNFSQLSNLKVHLRVHSGEKPY
RCEICRRNFTQLAHLQKHIQVHTGEKPHQCHVCNRRFSSCSNLKTHLRLHSGERPYVCKQ
CPASFTQHIHLRLHRRLHATPRSHQCPQCPRRYTHLCSLQIHRQQFCPASSGTGSASQLD
SANDEIERFDLSEGAESLEVDMEAESIKRMCRVIWTQVLAG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaaaacactcgccagcacagcagacgagagcatcgctgtgcaaactgaggag
agcgtggatgtgacacgcagctgtcatgttaaagatcaatgtgagatggactttgatgag
tggaaggaaaccagagctcagacaccattacccagaaacctcagatttacacatcacaat
cagaaggtgctgggtgtttttaccagagaggtcattcctgtagggacccggttcggcccg
ttgcagggagaacatctccaccctgaagacatatctgcaaacatcaaccggaaacacatc
tggatgatcttctcggaggggcgtttacatcacttcctgtcttgtgaggatgagagtgac
agcaattggatgtgctttgtaaattctgccccgtctccttggcaacagaatcttgccgga
ttccaaattggaatgcaggtatacttctatgcagtgaaggatctaatgccgggggaggag
ctactagtggggcggagcttagaatacaagcggccaatgagcaccagcctcagaacaccc
tgtctgaagcagccacctccaacacaccctcattctcaagataaaaatcaagtgatgaag
agaaagaaaggttataccgtcactgagatcctggatctgaatccctggactgatcatcac
attcaaactccgcttatcacacaatctaaatatggggaaaaagtgaccagagacctgcag
aatcctaaattacctccatctttgatgactaatagcatctctgacattcctttaaacgta
ggaggacatgtatacacccctgctatcccacaatccgctatgccaagcaatgcaaccgat
ccctctcctggggaagtatccaatgtggatgacaccacagccaagagagtctcctcctcc
tccgtcacacacgtcacagagtctcagaagaaacagactgcagggtacaaggctttaccg
tatccactgcagagacagaacggaaagatccagtatgaatgtaatgtgtgcgggaagaac
ttcagtcaactgtcaaacctgaaggtgcacttgagggttcacagtggtgagaagccgtac
aggtgtgaaatctgcagaaggaatttcacccagctggctcaccttcagaagcacatccag
gttcatacgggagagaaaccacaccaatgccatgtgtgtaacaggcgtttcagcagctgc
agtaacctgaagactcacctgcgcctgcactcaggggagcgcccgtatgtgtgtaagcag
tgtcccgccagcttcacccagcacatccacctgcgcctccacagacgcctgcacgccacc
ccacgctcacaccagtgcccgcagtgccctcgcaggtacacacacctgtgcagcctacag
atccaccgccagcagttctgtcccgcctccagcggcacaggctccgcctctcagctggac
tcagccaatgacgagatcgagaggtttgacctcagcgaaggtgcagagagccttgaggtc
gatatggaggcggagtctataaagaggatgtgtcgggtgatctggactcaggtgcttgct
gggtag
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