Rhinichthys klamathensis goyatoka (western speckled dace): 130103024
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Entry
130103024 CDS
T09701
Symbol
sele
Name
(RefSeq) E-selectin isoform X1
KO
K06496
selectin, platelet
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130103024 (sele)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130103024 (sele)
04090 CD molecules [BR:
rkg04090
]
130103024 (sele)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130103024 (sele)
04091 Lectins [BR:
rkg04091
]
130103024 (sele)
Cell adhesion molecules [BR:
rkg04515
]
Lectins
Selectins and C-type lectins
130103024 (sele)
CD molecules [BR:
rkg04090
]
Proteins
130103024 (sele)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
130103024 (sele)
Lectins [BR:
rkg04091
]
C-Type lectins
Selectins
130103024 (sele)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
Motif
Other DBs
NCBI-GeneID:
130103024
NCBI-ProteinID:
XP_056125180
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MGVCDKVPLHFFASLVLISSVLNIWRGTEGWSYHPSHFKMNWEHARQWCRQNYTDMVAIQ
NKEEISHLNNFLPKVNGYYWIGIRKIDDRWTWVGTNKTLTKEAENWADKEPNNGRNNEDC
VEIYIKREKDEGKWNDESCLKKKTALCYTASCKDDSCVSGQGECVETINSHTCSCFKGFS
GERCEHVVKCKPNEVTPAAHASVQCFHPKGNFSYDSQCEYSCEEGYELKGSSTTRCTSTT
EWSSKPPTCELVQCPELIKPQKGEMRCNHPMGQFSYQSSCEFVCEEGYKLRDNSSSTLFC
GATGYWNDSQPTCEIVKCKPEDVTPPDHASVQCSDPTDFSYESQCEYSCEEGYELKGSST
TRCTSTTKWSSKPPTCELVQCPELIKPQEGEMRCNHPMGQFSYQSTCEFVCEEGYKLRDN
SSSTLFCGAAGHWNNSQPTCEIVKCKPEDVTPPDHASVQCSDPTDFSYESQCEYSCEEGY
ELKGSSTTRCTSTTEWSSKPPTCELVQCPDLIKPQKGEMRCNHPMGQFSYQSTCEFVCEE
GYKLRDNSSSTLFCGATGYWNDSQPTCKIVNCKPEDVTPPDHASVQCSDPTDFSYESQCE
YSCEEGYELKGSSTTRCTSTTEWSSKPPTCELVQCPDLIKPQKGEMRCNHPMGQFSYQSS
CEFVCEEGYKLRDNSSSTLFCGATGHWNDSQPTCEIVNCKPEDVTPPDHASVQCSDPTDF
SYESQCEYSCEEGYELKGSSTTRCTSTTEWSSKPPTCELVQCPELIKPQEGEMRCNHPMG
QFSYQSSCEFVCEEGYKLRDNSSSTLFCGAAGRWNDSQPTCEIHHCPALDSPVNGELSCT
LSFSYGSKCSFSCVEGFLLQGASEISCTKTAKWSHEPPHCEAVVCPQLPEPINGHMNCSS
EEHTFGTICTFGCLDGHQLIRNEIMTCNLNGSWSGEVALCQADPDPSASLIKATEVTLGV
AGIIGSSSLLVYWILKRLRSKSNKFDLNSTSDIEDPPQIYKSVDSLI
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtttgcgacaaagtacctttgcacttttttgcttcccttgttcttatttcttca
gtgctaaacatatggagaggcactgaaggctggtcataccatccctcccacttcaaaatg
aactgggaacatgccagacagtggtgcaggcagaactatactgacatggtggccatccag
aacaaagaggagatttctcacctcaacaacttccttccaaaagttaatggatattactgg
attggcattcgtaaaattgatgacaggtggacctgggtgggaactaacaagacacttacc
aaggaagctgagaactgggcagataaggagcccaataacggaaggaataatgaagactgt
gttgaaatatatattaaaagagagaaagatgaaggcaaatggaatgatgaatcctgctta
aagaagaagactgcactgtgctacacggcgtcctgcaaggatgactcttgtgttagtggt
caaggagaatgtgtagaaaccataaacagtcatacatgctcatgctttaaaggattctct
ggagaacgatgtgaacatgttgtaaaatgcaaaccaaatgaagtcacaccagcagctcat
gctagtgtccagtgctttcatcccaaaggaaatttctcatatgactctcagtgtgaatac
tcctgtgaggagggatatgaactaaagggctccagtacaacaagatgcacttctacaaca
gagtggtcaagcaaaccaccaacctgtgaacttgttcaatgtccagagctgatcaaacca
cagaaaggtgaaatgcggtgtaatcatccgatgggccaattcagctaccaatcttcctgt
gagtttgtatgtgaagaaggatataagctgcgagacaacagctcctctacactgttctgt
ggagcaactggatactggaatgattcacaacccacttgtgaaattgtaaaatgcaaaccg
gaggacgtcacgccaccagatcatgctagcgtccagtgctctgatcctactgatttctca
tatgagtctcagtgtgaatactcctgtgaggagggttatgaactaaagggttccagtaca
acaagatgcacttctacaacaaagtggtcaagcaaaccaccaacctgtgaacttgttcaa
tgtccagagctgatcaaaccacaggaaggtgaaatgcggtgtaatcatccgatgggccaa
ttcagctaccaatctacctgtgagtttgtatgtgaagaaggatataagctgcgagacaac
agctcctctacactgttctgtggagcagcgggacactggaataattcccaacccacttgt
gaaattgtaaaatgcaaaccggaggacgtcacgccaccagatcatgctagcgtccagtgc
tctgatcctactgatttctcatatgagtctcagtgtgaatactcctgtgaggagggttat
gaactaaagggctccagtacaacaagatgcacttctacaacagagtggtctagcaaacca
ccaacctgtgaacttgttcaatgtccagacctgatcaaaccacagaaaggtgaaatgcgg
tgtaatcatccaatgggtcaattcagctaccaatctacctgtgagtttgtatgtgaagaa
ggatataagctgcgagacaacagctcctctacactgttctgtggagcaactggatactgg
aatgattcacaacccacttgtaaaattgtaaattgcaaaccggaggacgtcacgccacca
gatcatgctagcgtccagtgctctgatcccactgatttctcatatgagtctcagtgtgaa
tactcctgtgaggagggttatgaactaaagggctccagtacaacaagatgcacttctaca
acagagtggtctagcaaaccaccaacctgtgaacttgttcaatgtccagacctgatcaaa
ccacagaaaggtgaaatgcggtgtaatcatccaatgggccaattcagctaccaatcttcc
tgtgagtttgtatgtgaagaaggatataagctgcgagacaacagctcctctacactgttc
tgtggagcaactggacactggaatgattcacaacccacttgtgaaattgtaaattgcaaa
ccggaggacgtcacgccaccagatcatgctagcgtccagtgctctgatcctactgatttc
tcatatgagtctcagtgtgaatactcctgtgaagagggttatgaactaaagggctccagt
acaacaagatgcacttctacaacagagtggtcaagcaaaccaccaacatgtgaacttgtt
caatgtccagagctgatcaaaccacaggaaggtgaaatgcggtgtaatcatccgatgggc
caattcagctaccaatcttcctgtgagtttgtatgtgaagaaggatataagctgcgagac
aacagctcctctacactgttctgtggagcagcgggacgctggaatgattcacaacccact
tgtgaaattcatcactgcccagccctcgacagccctgtcaatggagagctgagctgtact
ttaagctttagttatgggagcaaatgcagcttcagttgtgtagaaggattcctcctccag
ggggcttcagagatcagctgtacaaaaacggcaaagtggagtcatgaaccacctcactgt
gaagcagtggtctgtccacaacttcctgagccaatcaacgggcatatgaactgctcatct
gaagaacacaccttcggcaccatctgcaccttcggttgtcttgacggccaccaacttatc
aggaatgagataatgacgtgcaacctcaatgggagctggtcaggggaagtggcattgtgt
caagctgatcctgatccttctgcatcacttatcaaagcaacagaagtgactcttggggtt
gctggtattatcggcagctccagtctgttagtctactggatactgaagagactgaggagt
aaatctaacaagtttgacctgaacagtacctcggatattgaggatccaccacagatttat
aagagtgttgacagtctcatatag
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