Rhinichthys klamathensis goyatoka (western speckled dace): 130103165
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Entry
130103165 CDS
T09701
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130103165 (rxrgb)
03320 PPAR signaling pathway
130103165 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130103165 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130103165 (rxrgb)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130103165 (rxrgb)
Nuclear receptors [BR:
rkg03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130103165 (rxrgb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
130103165
NCBI-ProteinID:
XP_056125341
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MWHPPVLPLHDQSHGRENGHYNHHTSALNSPPSQPPPMSSMVGHPSVISSSRPLHSPMST
LGSSMNGLASPYSVIAPSLVSPSISLPSTPSMGFNTLNSPQMNSLNVNCSEDIKPPPGLA
PLGNMSSYQCSSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCREN
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKSDNEVESTSSFNEEMPVDK
ILDAELAVEPKTETYTESSPDNSTNDPVTNICHAADKQLFTLVEWAKRIPNFSDLPLDDQ
VILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPVEVEALREKVYASLETYTKHKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccgccggtgttgcctcttcacgatcagagtcacggcagagagaatggtcac
tacaaccaccacaccagtgctcttaattcacccccctctcagccgccacccatgagctcc
atggtgggtcatccgtccgtcatcagttcctcccgcccactgcactctcccatgagcacc
ctgggctcgtccatgaatggcctggcctctccctactcagtcatcgccccgtctctggtc
tcaccgtccatttccttgccctctacacccagtatgggctttaacactctcaacagccct
cagatgaactctttgaatgtgaattgctcagaagacatcaagcctccaccaggattggct
ccgctgggcaacatgagcagctaccagtgcagtagccctggatccctctccaaacacatc
tgtgccatttgtggagaccgatcttcagggaagcactatggtgtttatagttgtgaaggt
tgcaaaggcttctttaagaggaccatccgaaaagacctgacctacacgtgtcgagaaaac
aaagagtgcctgatcgacaaacgtcagcgcaaccgctgtcaatactgccgctaccagaag
tgcctagccatgggcatgaagcgggaagcggttcaggaagagaggcagcgtgggaaggag
aaaagtgataatgaggtggaatcaacgagcagttttaatgaagaaatgcctgtggataag
attctggatgcagagcttgcagtcgaacccaagactgagacatacacagagagcagccct
gacaactctacaaatgacccagtcactaatatctgccatgcagctgacaaacaactgttc
actctggtggagtgggccaagagaatacctaatttctccgatctgcctctggatgatcag
gtcattctgcttcgagcaggatggaacgagctcctcattgcttcattctctcatcgctca
atcacggttaaggatggcatcttgctgggcacaggtcttcacgtccacaggagcagtgct
cacagtgcaggtgtgggatccatcttcaacagggtactgactgagctggtgtctaaaatg
aaggatatgcagatggataagacagaactaggctgccttagagccatcgtcctcttcaac
cctgacgctaaaggcttgtccaacccagtggaggtggaggcactgagggagaaagtttac
gcctcactggagacctacactaaacacaaataccctgaccagccgggcaggtttgctaaa
cttttgttgcgtctgcctgccctccgatccatcgggctcaagtgtttggagcacctattt
ttcttcaagctgattggagacacacccatagacactttcctaatggagatgctcgaagca
cctcatcagatcacgtga
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