KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130103242
Entry
130103242         CDS       T09701                                 
Symbol
afdna
Name
(RefSeq) afadin
  KO
K05702  afadin
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04517  IgSF CAM signaling
rkg04519  Cadherin signaling
rkg04520  Adherens junction
rkg04530  Tight junction
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130103242 (afdna)
   04519 Cadherin signaling
    130103242 (afdna)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    130103242 (afdna)
   04530 Tight junction
    130103242 (afdna)
SSDB
Motif
Pfam: AFDN RA DIL PDZ FHA RA_2 PDZ_6 PDZ_2 RASSF8-10_RA RA_3 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 130103242
NCBI-ProteinID: XP_056125427
LinkDB
Position
Unknown
AA seq 1853 aa
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIMPKRALTNGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPD
GDDHTLNREDGDSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDGR
PDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIHA
NDKQVKETILDDTDCPLQILRDWTSDKEALVFQLKKRPPDYVPRKGRKPDTRMGQQGSIP
PEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYRLQHSVTEVGSDRSEEGNIQLA
GPGILPHHCDLMHADGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQFGATHVFKFVD
PSYDHSMSKRDPGLMMKGRHKSGSVAETTFDLHGDIHSGSGLPTSKSSGKLEMERPGNNS
ERGLVKPMIRGEQQDFNKHDGRSQDGPELTLPASIEFRENSEDAFLSAIINYTNSSTVHF
KLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAF
WMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMPAFLEDPD
EQNPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTEADSGL
CSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNINNTC
FKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQ
LPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADCDSHF
SADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGAADMDGRL
TAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLSQPSPMMPR
ASDRGRGDKGKLRPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLKNRADHRSS
PNVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYPREYFTFP
ASKSQDRMGPGQPWQNNEPEPLPPMDNHSNNSMRVARSQEELCDIPGGYPGERLRQEDLM
LLQQQQREAEYQRGGGEHWNHQVSSSVESSTSSQEHLNFSSSSGSRSQGNHKSGPGRWKT
PIVPNSGPVGVSQPSRSDLPPPPPPPPAHYDYEPQPDMPLPPPPSVSQQQAVAAADRKKR
EEQQRWYEKEKARLEEERERKRRDQERKLVQIRNPAVPGPAMHNNQHGPLPPAPQHQQMP
HPQPPMPVQVPQPYLPPVQLPQPPPPQPTRPDKLSSLPRQPPQDTVIRDLLPQQQPRTIE
RRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQELQAKPERTA
EESDRMRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEKRARQTAVPAI
SVLDLLQDEERRRKQQLEEIRKREAEERAKQEEERRWREEERARRETEEKRRQEEEYYTR
LEAGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPPSPASTPTTNINNSAPPPPPQRNTS
YLKTQVASPDTIYTAKFVSYNDEEDEDEEDAGLTGFNSYTGSTTGLGSGEVYNDPREKWM
KGGPDQENTIGGAPENMTFKERQRLFSQGKEVSNKVKASRKLMELENELNIKQ
NT seq 5562 nt   +upstreamnt  +downstreamnt
atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccaaccgactgaggacttggagttccatggc
gtgatgcgcttttacttccaggaccgcgtggcggggaacttcgctacaaagtgtatccga
gtgtccagcacggccaccacgcaggatgtgatcgagacgctggcagagaagttcagaccc
gacatgaggatgctgtcttctcctaaatactccctctatgaggtccacgtcagtggcgaa
gagaggaaactggacttggacgagaaaccactggtcgtgcagctgaactggaacaaagac
gacagggagggccgcttcgttctcaagaacgagaacgacatcatgcccaagagagcactg
acaaatggccctgagaaggagaaggagggggtgatccagaacttcaaaagaacactgtcc
aagaaggagaagaagaaagagaagaagagggagaaggaggccttttctagaattccagat
ggagacgatcacacactgaaccgtgaggatggagactccaggttggctgctgaggtatat
aaagatatgccagagaccagttttacacggactatttctaaccccgaggtggtgatgaag
aggagacgacagcagaagctagagaagaggatgcaggaattccgcagcggagatggtcga
ccggattcaggagggactctgaggatctacgccgatagtctaaagcccaacattccctac
aagaccattctgctctcaactactgatatggctgattttgctgtggccgaggctctggag
aaatatggtctggagaaggaaaaccctagagattactgcatcgcccaggtgattcatgca
aatgataaacaagtgaaggagaccatcctagatgacaccgattgccctctgcagatcctc
agagactggaccagtgataaagaggccttagtattccagctgaaaaagcgtcctccagac
tacgttccaaggaaaggacgtaagcctgacaccaggatggggcagcagggatccattcct
ccggagaaactgccctacctggttgaactgagcccagggcgagggagtcactatgcctac
tactaccgccatcatgaagatgggtcagactccagggataaacccaaactctaccgacta
cagcacagcgtcactgaagtcggatctgatcggagtgaagagggaaacatccagctggct
gggcctgggattctgcctcaccactgtgacctgatgcatgccgacggcttggtgaccgtg
acccctgtcagtttggacgccgagacgtttgtagatggacagcggatctcggacactacg
gttctgcgcagcggtgtgactgtccagttcggggccactcacgttttcaaattcgtagac
cccagctacgaccacagcatgtccaagagagaccccgggctcatgatgaagggaagacac
aaatcaggaagcgtcgcagagacgacctttgaccttcacggggacattcatagtggctct
ggtctccctacaagcaagagttcagggaagctggagatggaacgtcctggaaacaacagt
gaaagaggcctggtgaagcccatgatcagaggagaacagcaggactttaacaagcatgat
ggaaggtcccaggacggcccagagctcacactgccggccagcattgagttcagggaaaac
tccgaagatgcctttttgtccgccatcattaactacaccaacagctcaacggtgcacttc
aagctgtctcccacttacgtgctgtacatgacctgccgttacgtcatgtccagccaatac
cggcccgacatcagcccgtccgagcgcacgcacaaggtcatcgccattgtcaacaagatg
gtgagcatgatggaaggagttatccagaaacagaagaacatcgccggggctctggccttc
tggatggctaacgcctcggagctgttgaacttcatcaagcaggacaaggatctgagtcgc
attacgctagacgcacaggatgttctcgctcacctggttcagatggctttcaagtacttg
gtgcactgcctgcagtcggatctgaataactacatgccagctttcctggaagatcctgat
gaacagaaccctcagaggcccaagatagacgatgttctgcacacgctgacgggcgccatg
tcccttctgcggcggtgccgagtcaatgcggccctcaccatccagctgttctcgcagctc
ttccacttcatcaatatgtggctctttaacaagctggtgacggaggccgactcgggcctg
tgctcgcactactggggcgccatcttacgccagcagctcagccatatcgaggcatgggct
gagaaacagggactggagctggctgcagactgtcacctcagccgcatagtccaggcaacg
accctcctcaccatggacaagtactccatgcaagacgtgcagaacatcaacaacacctgc
ttcaagctcaactctttgcagctcaacgctctgctgagcaactaccactgcgctcccgat
gaaccctacattcctcctgagctgatcgatcatgtggtggctgtggccgagaacacggca
gacgaactggcccgaagtgatgggcgggaagtacagctggaagaggaccctgacctccag
ctgcctttcctactgcctgaggacggctactcatgcgatgtggtgcggaacattcccaat
ggattccaagagttcctagatccgctttgccagagaggtttctgtagattgacccctcat
ccacgctctccgggaacttggaccatctatttcgaaggagccgattgcgacagtcatttc
tcagctgacacgtcagaactgccaatgcggaaggaaccggaaattgtgactgtgactttg
aagaaacacaatgggatgggcctcagtattgtggcagccaagggtgccgggcaagacaaa
cttggtatttacatcaagtctgttgtcaaaggaggtgcggcagacatggatggccgtctg
actgccggagatcagttgctcagcgtggatggacgaagtctggtcggtctctctcaggag
agggcggcggaattgatgacacgaaccggctcggttgtaacgcttgaggtggccaaacag
ggagccatttaccacggcctggccacgctcctcagccagccatcccccatgatgccccgc
gcatcagaccgtggacgtggagacaagggaaagctaagaccaaagagtgagggctttgag
ctctataacaactctgtgcagaatggctctcctgagagcccccagggcacgtgggacacc
tatcctgaaccaaagaaggaggacaggttgttgaagaatcgtgcagaccaccgctccagc
ccaaatgtggctaaccaggctcagagtccaggtgggaagcctgtttacccaggagcccca
ggaaagatcacttcagtctcaacgggaaacctctgccctgatgaggagccctctccaccc
cgtccagaggcttatccgatccccactcagacatacccaagggagtatttcaccttccca
gcctccaaatctcaggacaggatgggccctggccagccctggcaaaacaatgaaccggag
cctcttccccctatggataaccactctaacaacagcatgcgggtggcgcgctctcaggag
gagctgtgtgacattccgggcggatacccaggtgaacgtctgcgtcaggaagacctgatg
ctcctgcagcagcagcagcgtgaggctgagtaccagcgaggtggaggcgagcactggaac
caccaggtgtcctcttcggtggagtccagtacctccagccaagaacatctcaacttttcg
tcatcctctggctctaggtcccagggcaaccacaagagcggccctggccgctggaaaacc
ccaatagttcccaattccggcccagtgggcgtctcccaaccctcccgttctgaccttccc
cctcctcctcctcctccacccgcacactacgactatgagccgcaaccagacatgccgctt
cctccaccaccgtctgtttcacagcaacaggcggtggccgcggccgatcgcaagaaacgc
gaagagcaacagcgctggtatgagaaggaaaaggcccggctcgaagaggagcgagagagg
aagagaagagaccaggagaggaagttggtacagattcgcaaccctgccgtccctggccct
gccatgcacaacaaccagcacggcccgctgccacctgcccctcagcaccaacagatgccc
catccacagccccccatgccagtgcaggtgccccaaccgtaccttcccccggtccagctg
ccacaaccgccgccgccacaaccaactcggcccgataaactatccagccttcctcgccaa
ccaccacaggacactgtaatccgtgacctcctgcctcagcagcagccgcgcaccattgag
aggcgcgacctgcaatacatcaccatcagcaaagaggaactgtccgccagcgacagcctg
tcgcccgacccctggaagagggacgcccgcgagaaactggagaaacagcagcagcttcac
atcgtggacctcctggacaaggagatccaggagcttcaggccaagcccgagcgcaccgcc
gaggagagcgaccgtatgcgcaaactcatgctggagtggcagttccagaagagactgcag
gagtccaagcagaacgaggaggatgaggaggaggaggatgacgaagatgtagacaccaca
ctaattatgcagagactggaggcggagaagagagcacggcagactgctgttccagcaatc
tctgtactagacttgctacaggacgaggagcgacgacggaaacagcagttggaggaaatc
cgtaagcgtgaagcagaagaacgagccaaacaggaggaggagagacgctggagagaggag
gagagagccagacgagagactgaggagaagaggagacaggaggaagagtactacacccgc
ctggaggcagggcggcgccggcagcacgaggaagccgagcgtaagctgctaacgccagac
gagcctggtctgtacagacctccccttccccgggactaccagcccccttcacccgcaagc
acccccaccactaacatcaacaacagcgcccctccgcccccgcctcagagaaacacctcc
tacctcaaaacccaggtcgcctcccccgacaccatatacactgccaagtttgtctcgtac
aatgacgaggaggatgaggatgaggaggacgcgggcctaacaggatttaattcgtacact
ggaagcacaacaggactaggatcaggagaagtttacaatgacccgagagagaagtggatg
aaaggcggccccgatcaggaaaacacaataggcggagctccagaaaatatgacatttaag
gagcgccagagactcttctcacagggaaaggaagtgtcgaataaagtgaaagcgtcccgg
aagctcatggaactggagaacgaactgaacataaagcagtag

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