Rhinichthys klamathensis goyatoka (western speckled dace): 130103318
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Entry
130103318 CDS
T09701
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130103318 (nlrc3)
Pattern recognition receptors [BR:
rkg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130103318 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
130103318
NCBI-ProteinID:
XP_056125537
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MARHDHIPWEEYCYLDLKSNAQKQETSKRMEDPGWLRRHQALLQRFLSTSILVNVVHHMR
KADLLNTQEVGLIQEMGALKDKVHLLVEFLSVTDPHGAALQTYLQSSHQTEYNLITIHDS
VVRPHKDALLQRLKDDEKTQAGGSSHGSSFLLIECVSDLQQREHDLVQVSVNRGAGPLHG
RALGLDKLIVPLTRVSTAPRVTLTVGVAGSGKTRMVHRFIQLWSSGHIYPELSLAIPIAC
WELSSFDRLSVERLLRLFVPYDNMDVITFNESCKILLILDGLEEFRQSLDFADAPPTSDP
RREIPVSDLIANIVRGNLLPWATLWLLSRPGVGAKVPAGLVDRVTEAPPLSRTQIKNYID
HCITNKLDVYSLSQESSSSQTYTPEDVSSQVWTYLNSQKPLLILSSVPAVCHIIVTTLSR
LIKLDSDSTPLPRTLTEVYAHYCWPQLSGSDPASGSIRKPLSSLGRLAFYSLLRRRYTFS
ENELRTYGVDVPPQVGTLGHRILQRKQSWSYDSVVWQFTHTSVQEFLGALFYYVSSRRGM
FDLFSESSVSWPRIGFHSHYRAALQKTNQSDAAAQGNLDLFMRFLSGLMSPAVTALLGGP
LGISREEQVTQRTTATNLLQNTVTGTGGDAVSMRSVTIVTCLAELQQGEWLRSVEEDLIN
CGLRGKLKGGVCSVLAYLLQVSDACTEETQLSNCLDSSSLKRLLPQLLYCSNLRMENNEF
KEGAMELLGSLLSAKECHIQMLSLADNSISSKGVNPLSRALLVNRTLTALDLRGNNIGAK
GAKTLSEALKMNQVLVSVNLQSNQIEDDGARALAEVLQSNRKLTTLNLQKNGIGAEGVKK
IADALTKNQTLQDLNVSGNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIRALSHA
LQSNRGLSCLNLRENSIGVSGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRVN
RAITSLHLQWNFMKAGAAKALAQSLMSNTCIQLLDLQENALGDNGVIALACALRSNSSLG
VLYLQGVSAGKSGAVALANALVVNETLHTLDLRGNSIGMEGAKAFSSALKNNRGLRSLNL
QENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKAGAPDCVVDI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggctagacatgaccatatcccatgggaggaatactgctacctggatctgaagtccaat
gctcaaaaacaagagactagcaaaaggatggaagatcccgggtggttacgcagacaccag
gctttgttgcaaaggttcttatccacctccatcttggtaaatgtggtccatcacatgaga
aaagcagacctgctcaatacacaggaggtggggcttatccaggaaatgggggctttgaag
gataaagtgcatttattggttgagttcctgtctgtcactgatccacatggcgccgccctt
cagacttatcttcaaagttcacaccagactgagtacaaccttataactatacatgactct
gtggttcgaccgcataaagacgctctacttcagcgactcaaagacgatgaaaaaactcaa
gccggtggaagctcacacggttcctctttcctccttattgagtgcgtatctgaccttcag
cagcgagaacacgaccttgtgcaggtgtcagtcaacagaggggcggggcctcttcacggt
cgagcgctgggattggacaagctgattgtgcctttgacgagggttagcaccgccccacgt
gtgacgctgaccgtgggcgtagctggcagcgggaagacccgaatggtccaccgtttcatc
caactttggagcagcggtcacatctatccagagctgagtcttgcgatccccattgcatgc
tgggaattgagcagtttcgatcggttatcggtcgagcgcttgctacggttgttcgttcca
tatgataacatggatgtaattacttttaatgagtcctgcaagatattgctaattttggat
gggttggaagaatttcgccaatcgttggattttgcagatgccccgcccactagcgaccct
cgtcgcgaaattccagtatcggacctcattgcgaatattgtacgaggcaacctgttgcca
tgggcaacgctgtggcttttgtcaaggcctggcgttggggcaaaagttccggcgggattg
gtcgatcgtgtgaccgaagccccgcctctttcgcgaacgcaaataaagaattatattgat
cattgtataacgaacaagttagatgtgtactctttatcacaagagagctcatcgtctcaa
acgtacacacctgaggatgtctcctctcaagtgtggacttacctgaattctcagaaaccg
ttgctcattttgtcttccgtccccgcggtctgccacattatcgtgactacattatcgcgc
cttataaaattggattcagattccacgccccttccgcggactcttacagaagtctatgcc
cactactgttggccacagctctctggatcagacccggccagtggcagcatcaggaagccg
ctgagctctctgggtcgtcttgcgttttatagccttttacggcgacggtatacattcagc
gagaacgaattgcgaacttacggtgttgacgtacctcctcaggttgggactctcggccac
cgcatcctccagcgcaagcaaagctggtcgtacgatagcgtggtgtggcagttcacgcac
acgtctgtgcaggaattcctgggagctcttttttactacgtttcgtcaaggcgtgggatg
tttgatctgttctccgaaagtagtgtctcctggccccgcattggcttccacagtcactac
cgtgcagcgctgcagaaaaccaaccaatcggacgccgcagcgcaaggcaacctcgacctc
ttcatgcgcttcttgtcagggctgatgtctccggcggtcaccgctttgctaggtggtcct
ctgggcatttcccgcgaggagcaggtgacccagcgcaccacggcgacaaatttgcttcag
aatacggtgacggggacaggaggcgacgccgtaagtatgcgcagcgtcacaatagtcacg
tgtctggcggagctgcaacaaggggagtggctacggtcagtcgaggaggatctcattaac
tgcggcctgcggggaaagctgaagggtggagtttgctctgtgctagcttacttgttgcaa
gtatcagatgcatgtacagaagaaacgcaactgtctaattgcctagactcctcctcccta
aagaggctcctcccacaactgctgtactgcagtaatctgagaatggaaaacaatgaattt
aaggaaggtgccatggagctgttgggaagtctgttgagtgccaaagagtgccatattcag
atgctcagtctggctgacaactcaatcagcagtaaaggagttaatccactcagtcgggct
ctactcgtcaaccgaaccctcacggccctggacctccgtggcaacaacatcggcgccaag
ggagcgaagaccttgagcgaggcactcaaaatgaatcaggtcctcgtgtcagtcaatttg
cagagtaaccagatagaggatgacggtgctcgtgcgctggcggaggttcttcagtcaaac
cgaaagctcaccacactgaatcttcagaagaacggcattggagcagaaggagtgaaaaaa
atcgcagacgccctcacaaagaatcaaactctacaggatctcaatgtgtccggcaatcat
ctgggtgatttgggaacagtggctctggctcaagcgcttatggtcaaccacgttctccac
acgctcagtcttcagagtaactctgtgagtgacagaggcattagagcgctctcacacgct
cttcagtcaaaccgaggactcagctgtctgaatctaagggagaattcaataggagtttct
ggtgccaaagacatcgccaaagccttaaaagtcaacacgtgtcttagagaactcgatctg
accgctaatcttcttcatgatgagggtgtgacggccatcgctgaagccatgagggtcaac
cgagcgatcacatccttacacctccagtggaacttcatgaaggctggagcagctaaagct
ttagctcagtctctcatgagcaacacctgcattcagcttctggatctgcaggagaacgct
cttggtgataatggtgtcattgctctggcctgtgctctgaggtcaaactcttctctcggt
gtgctctatcttcagggtgtatcagcaggtaaatcaggagccgttgcactagccaacgct
ctggtcgtcaatgaaacccttcatacactagatctgcgtggaaactccatcgggatggaa
ggagcgaaggcgttttccagcgctctaaagaacaacaggggtttgagaagtctgaatcta
caggagaactctctggggatggacggagcgatcttcatcgcgactgcactgagaggaaac
catcagctcacctacatcaatctccagggtaatggcatcggggagtcgggggcaaaggtc
gtgtcagacgccatcaaagctggtgcaccagattgtgtggtggatatctag
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