KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130103326
Entry
130103326         CDS       T09701                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rkg03037]
    130103326 (ift140)
Cilium and associated proteins [BR:rkg03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   130103326 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd tRNA_int_end_N2 TPR_GEMI5 TPR_COPA_B Beta-prop_CAF1B_HIR1 TPR_IFT80_172 Clathrin WD40_MABP1-WDR62_1st Consortin_N Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 130103326
NCBI-ProteinID: XP_056125550
LinkDB
Position
Unknown
AA seq 1451 aa
MAVYFDHRVEAPDSGGAAVLVSWHSSVCVLAVGSVNASSGGCVDLYLQQGEHVELCHVER
GFSPSLLQWHPTKPLLAVGWETGETILLSHPSGEHTPLPNNTHTACITVLEWSSNGSRLV
TGDQAGVMAVWRVDARGKLQGSPLIKHDYSKPLTCCIFRPTAPAEDVATLARAAVSGDES
ALDMFNWKKSNKGAVFAMGSQEGLAFYISAADGSVYSVDEQARSVALLSVESAVQKMWYS
KRRAVLAVVTESLQLSQFSVGPEGFTQEISKVKLSSRGGQHTDIVWTENGLLITASGEQH
IRLWDVELDDHYALSLDESLGFEKGELLNCVSFCISKQVLAAGTSMGRVALWHMVTVSDQ
KGDTKTQWKLQTPAEVEGNISQLQWGSSSHLLAVCSSNSSCVVILSEHVMCSHYSQQMAA
VQLTPTQLSLANFNTNTHITFHTDTHIRAVQVTKDMVAVWNGKYITVYEPSGQTLHSTGS
FQCESAALALHDENIYTIEPNRVQIRTPQGTVKQLLVFSEVEGNPTLLSVCGSYLAVGTD
TSHVRVFNLTRREAKPLGVTKNLCELIPDLGALRSVKCNASGSQLSVLVTQVNGRPDNKV
YFYDIELDTLSYFDFFTGRPESSLALSDDSQRTRCEGELAARCPVSQFWDENEPRLFVCE
TVPVNSDLLRSSQSQTEKEDVMVVTFFVTQEHGLLLQDSQPKPATLLSLLALDTPYYYYI
CKLGEVGDQSQAVSTPAEAPQVPSAPQMVVRRALRDFVGLESCEKQTRDAMLNFSFYLTI
GDMDEAFKAIKLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALRDAEKEPEL
EAQVAVLATQLGMLEDAERLYKSCGRFDLLNKFYQAAGQWQQAVETAETHDRIHLRTTYY
SYAKHLEAMGDKNLALVYFEKSDTHRFEVPRMLMEDNVSLEIYINKMKDKDLYKWWGHYL
ESQSDMEAALHYYAFAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVARQYEGQDE
ISQSVHFYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEKGTHMDRAV
MLYHKAGHVSKALELAFATEQFGALQLIAEDLNETSDPALLARCSDFFIKHAQYQKAVEL
LVAAKKYHEALQLCLDQSLNITEDLAESLTVSKDSTHLSEAERKELLEKIADCCMRQGNY
HLATKKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRNDPDI
MKNIIGFYTKGRALDLLAGFYEACAEVEIDDYQNYEKAYGALTEACKCLTKAKGRSGDEA
DSRILILTHKLGLIKRFIQARRMHEEDPVEAVRVCESLLEEKDLDPAVRIGDVYGFLVEY
YCHHGNFQQAWSKIEELRSTRPNINVSLYVSQTSLEAIQNAAGIRLVYGNTNAAHAADDD
EEVEEDENINH
NT seq 4356 nt   +upstreamnt  +downstreamnt
atggctgtgtattttgatcatcgtgtggaggcccctgacagcggtggagcagcggtcctc
gtctcatggcactccagtgtgtgtgtgctggccgtgggctctgtgaatgcctccagcggc
ggctgtgtggatctttacctgcaacagggagagcatgtggagctgtgtcatgtggaacgg
ggattcagcccttcgttgttgcagtggcacccgactaaacccctgctggcggtggggtgg
gagacgggcgagaccattctcctctcacacccctccggagaacacacacccctgcccaac
aacacacacaccgcctgcatcacagtgctggagtggagcagtaacggcagcagactggtc
acgggggatcaggcaggtgtaatggcggtgtggagagtggacgctagagggaaactgcag
ggatctcctctgattaaacatgactacagtaaaccactgacgtgctgcatcttcagacct
acagctcctgctgaggatgtggcgacgctggcccgcgctgctgttagcggggatgaaagc
gctctggacatgtttaactggaagaagagcaataaaggagcagtgtttgcgatgggatca
caggaaggactggccttctacatcagtgcagctgatgggagcgtgtacagtgtggatgag
caggcgcggagtgtggcgttgctgtctgttgagagtgcggtacagaagatgtggtactcc
aagaggagagccgttctcgccgtggtgactgaatctctgcagctctctcagttcagtgtt
gggccagaagggttcactcaggagatcagtaaggtgaagctcagtagcagaggagggcag
cacacagacattgtgtggacagaaaacggtttgctcatcacagcatcaggagaacaacac
atcaggttgtgggatgtggagttggacgatcattacgctctctcgctggatgagtctctg
ggcttcgagaaaggagagctgctcaactgtgtgtccttttgcatttctaaacaagttctt
gcggcaggtaccagcatgggtcgtgttgctctttggcacatggtgacggtcagtgatcag
aaaggtgacacaaaaacacagtggaaactccagacaccagcagaggtggaaggaaacatc
tcacagctacagtggggctcgagttctcatctgttggccgtctgcagcagcaacagcagc
tgtgtggtgattctatcagaacatgtgatgtgttctcattacagccagcagatggcggca
gtgcagctcacaccaacacagctcagtctggccaacttcaacaccaacacacacatcacc
ttccacacagacacacacatcagagccgtgcaagtcaccaaggatatggttgcggtgtgg
aatgggaaatatatcacagtgtatgagccatcaggacaaacactacacagcacaggttct
ttccagtgtgagtctgctgctcttgcgttacatgatgaaaacatttataccatagaaccc
aaccgcgtccagatccgcacaccacagggcacagtgaaacagttgctggtcttttctgaa
gtggaaggaaacccgacactgctgagtgtgtgtgggtcttacctggctgtgggaacagat
acgtctcacgtcagagtctttaacctcacacgcagggaggccaaacccttgggcgtcaca
aagaacctctgtgagctcattcctgacctgggcgctctgagatcagtcaaatgcaacgcc
agcggcagtcagctgagcgtcctcgttacacaggtgaacgggcggccagataacaaagtg
tatttctatgacatcgagctggacacgctgtcttacttcgactttttcacagggaggcca
gagagcagtctcgcactgtccgacgacagtcaaagaactcgatgcgagggggagttagcc
gcccgctgccctgtttctcagttctgggacgagaatgagccgcgtctgtttgtgtgtgaa
acagttcctgtgaactctgacctcctcagaagtagccaatcacaaacagagaaggaggac
gtgatggtggtgacgttctttgtgacacaggaacatggtctcctcctgcaggactcgcag
cctaaaccagctacgctgctctctctgctggctctggatacaccgtattactattatatt
tgtaagctgggtgaggttggagatcagagccaggcggtctcgactcccgccgaagcgccc
caggtgccgtcggcccctcagatggtggtacgacgagccctacgagactttgttgggttg
gagagctgcgagaagcagacgcgagacgccatgctgaacttcagcttctacctcactata
ggggacatggacgaagcgtttaaagccatcaaactcatcaagagtgaggcggtgtgggag
aacatggcgcggatgtgtgtgaagagtcgtcgtctggacgtggcgcgcgtgtgtctgggg
aacatgggtaacgcacgggctgctcgtgctctcagggacgctgaaaaagagccggagttg
gaggcacaggtggccgtactggcgacacagctgggcatgctggaggatgccgagcgtttg
tataagtcatgcgggaggtttgacttattgaataagttttatcaggcggcaggtcagtgg
cagcaggcggtagagacggcagaaacacacgaccgcattcaccttcgaaccacatactac
agctacgccaaacacctggaggccatgggggacaagaacctagcgctggtgtactttgag
aagtcagacacacatcggtttgaagttccgagaatgctgatggaggacaatgtttcattg
gagatctacatcaataaaatgaaagacaaggatctgtataaatggtggggccattatctg
gagagccaatcagacatggaggctgcgctgcattattacgccttcgctcaggactacctg
tctcaagtgcgcgtgcactgttatctaggaaacattcagaaggcgagtgagatagccaat
gagacggggaacagagcagcatcttatcatgttgcacggcagtacgagggacaggatgaa
atcagccagtcggtgcacttctacacacgagcacaagcatataacaacgccatccgactg
tgtaaagagaataacttggacgagcaactcatgaatctggcgctgcttagcaatccagaa
gacatgatggacacggccatgtattatgaagagaaaggaacgcacatggaccgagctgtt
atgctttatcataaggcaggtcacgtctctaaggcattagaactagcttttgccacagag
cagtttggagctctgcagctgatcgcagaggacctgaatgagaccagcgaccctgcctta
ctagcacgctgctccgatttcttcataaaacatgctcagtaccagaaagctgtggaattg
ctggtggctgccaaaaagtaccatgaggcgctccagttgtgtttggaccagagtttgaac
atcacagaagatctggctgaaagtctgacggtgtcaaaagactcgacccatctgtctgag
gccgagcgaaaggagctgctggagaaaatcgcagactgctgcatgcgccagggcaactac
cacctagccactaagaaatacacacaagctggaaacaagatcaaggcgatgcgagcgctg
ttaaaatccggcgatacagagaaaatagtgtttttcgcaggcgtttccagacagaaggaa
atttacataatggcagccaactacctgcagtctctggactggaggaacgacccggacatc
atgaagaacatcattggcttctacacaaaaggacgtgcactcgacctgctcgccggcttt
tatgaggcctgtgctgaggtggaaattgatgattatcagaattatgagaaggcgtatgga
gcgctgacggaggcatgcaagtgtctgactaaagcaaagggtcgcagtggagacgaggct
gacagcaggatcctcatactgacacacaaactcggactcatcaagagattcattcaggca
cgcaggatgcatgaagaggatccagtagaagcggtgcgtgtgtgtgagtctctgctggaa
gagaaggatctggaccctgcagtgcgtattggagatgtgtatgggttcctggtggaatac
tactgccatcatggcaacttccagcaggcatggagtaaaatagaggaattgagatcaaca
cgtcccaacataaatgtgagcttatatgtgagtcaaaccagtctggaggctattcaaaac
gctgctggaatccgcctggtctacggaaacacaaacgctgcccatgctgccgatgatgat
gaagaggtggaggaagatgagaacatcaatcattga

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