Rhinichthys klamathensis goyatoka (western speckled dace): 130103421
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Entry
130103421 CDS
T09701
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130103421 (smc3)
04114 Oocyte meiosis
130103421 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130103421 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130103421 (smc3)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130103421 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
130103421 (smc3)
Proteoglycans [BR:
rkg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130103421 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130103421
NCBI-ProteinID:
XP_056125639
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKMD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNAVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSQNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSEDLDTLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERGS
SSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagaccagactgtggtt
gaccccttcagctccaaacacaatgtcatagttggaagaaatggatcaggaaagagtaac
ttcttttatgccatacagtttgtgctcagtgatgagttcagtcatcttcgaccagagcag
cgtctggctctgcttcacgaaggcactggtcctcgagtcatttcagcctttgtggaaatt
atattcgacaactctgacaacaggctgccgatcgataaagaggaagtgtctctgcgccgt
gtcatcggagcaaagaaagaccagtacttcttggacaaaaagatggtcactaagaacgac
gtgatgaacctgttggagagtgctggtttctcccgcagcaacccttattacatcgtcaag
cagggaaagatcaatcagatggcgacagcgccagactctcagcgtctgaagctgctcaga
gaggtggcgggcaccagagtctatgatgagcgcaaggaggagagtatctcgctcatgaag
gagacagagggaaagcgagagaagattaatgagctgctgaagtacatcgaggagcgtctg
cacactctggaggatgagaaagaggaactggctcagtaccagaaatgggacaaaatgagg
agagctctggagtacaccatctacaaccaggagctcaacgagacccgggccaaaatggat
gagttgtccagtaagagagagacctgtggagacaaatctagacagctgcgagatgcgcaa
caagatgctcgagacaaagtggaggagacggagcgtgtggtgagggagctgaaggctcga
atctccgccatgaaggaggagaaagaacagctgagcgccgagcgacaggagcagatcaaa
cagaggaccaaactggaactcaaagccaaagatctgcaggacgagctggcaggaaacagc
gaacagaggaaacggctgctcaaagagcgccagaagcttctggagaagattgaagaaaaa
cagaaggagctgcaggaaacagaacccaagtttaacgctgtgaaagaaaaagaggagcga
ggaattgcccgactggctcaagccacacaagagcgaacagatctgtatgccaagcagggc
cgaggcagccagttcacctctaaagaagagagggacaaatggatcaagaaagagctgaag
tctctggatcaagccatcaacgacaagaaacggcagatcgccgccatccacaaagatctg
gaggacacagaggccaataaagagagaaatctggaacagtacaccaaactggaccaagac
ttgaacgaagtgaagactcgagtggaggagttggataagaagtactacgaggtgaagaac
cgaaaggacgaacttcagagtgagagaaattacctgtggagggaggagaacgcagaacag
caggcgctggcagccaaacgagaagacctggagaagaaacaacagctactgagagcagcc
accggaaaggctatcttgaatggtattgacagcattaataaagtattggaacatttccgc
cggaaaggcatcaaccagcacgtcataaacggttatcacggcattgtcatgaacaacttt
gagtgcgagcctgccttctacacctgtgtggaggtgaccgctggcaccaggctgttttac
cacattgtggaaacggatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgcctggagaggtcaccttcctgcctctcaccaaactggacgtcagggacaccgcttac
cctgagactaacgacgcaatccccatgatcagcaagcttcgttacagtcagaacttcgac
aaggccttcaaacatgtgtttgggaagactctgatctgccgcagtatggaagtgtccact
cagctggctcgagctttcaccatggactgcatcactctggagggtgatcaggtgagtcat
cgtggcgctctgaccggtggctactacgacacgcggaagtcccgtctggagctgcagaag
gacatgaggaaggccgaggaggagcttggagagctggaggccaaactcaacgagaacctg
cgtagaaacattgaacgtatcaataatgaaattgaccagctgatgaatcagatgcagcaa
atcgagacccagcagaggaagttcaaagcctccagagacagtatactctctgagatgaaa
atgctgaaggagaagagacagcagtcagagaaaacgttcatgcccaagcaacgcagtctt
cagagtctggaggccagcctgcacgccatggagagcacgcgggagtctctgaaggcagag
ctgggaacggacctgctctctcagctcagtttagaagaccaacgcagagtggacgacctc
aatgacgagatcagacagctgcaacaggacaacagacagctgctgaatgagcgaatcaag
ctggagggaatcatgaccagggtggagacgtacctcaacgagaacctgcgcaagcgtctc
gaccaagtcgagcaggaattgaatgaactgagagaaactgaaggaggaaccgtcctcact
gcgacaacgtcagagttggatggcattaataaacgcataaaggacactttggctcgctct
gaggatttggacaccctcattgataagacggaggtggaaataaaggatcatcagaagagt
atggagcgctggaagaacattgagaaggagcagaacgaagccatcaaccatgacaccaag
gagctggagaagatgaccaacagacagggcatgttacttaaaaagaaagaggaatgtatg
aagaagatccgcgagctgggctccttgccgcaggaggcctttgagaagtaccaaacgctc
acgctcaaacagttgttcaggaagctggagcagtgcaacacagagctgaaaaagtacagc
catgtgaataaaaaggccttggaccagttcgtcaatttctcagagcagaaagagaagttg
attaagaggcaggaagagctggacagaggatataaatccatcatggagctcatgaacgtc
ctggagctgcgcaaatacgaggctatccagctcaccttcaaacaggtgtccaagaatttc
agcgaggtgtttcagaagctggttcccgggggtaaagccactctggtgatgaagaaggga
gacactgagggtggacagtctcaggacgagggcgagggaggagacagcgagagggggtct
tcctctcagagcagtgtgcccagtgtagaccagttcactggcgtgggcatcagggtgtcg
ttcacgggtaaacagggagagatgagagagatgcagcagctctctggagggcagaagtct
ctggtagctctggctctcatctttgccatccagaaatgtgaccctgctcctttctacctg
tttgatgaaatcgaccaggctctggatgcccagcacagaaaagcagtgtcagacatgatt
gtggagctggctggacatgctcagttcatcactacgaccttcagacctgagcttctggag
tcagcagacaaattctacggcgtcaagttcagaaacaaggtgagtcacatcgatgtgatc
tcagcagagcaggccaaggactttgtggaggacgacaccactcacggctga
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integrated database retrieval system
