Rhinichthys klamathensis goyatoka (western speckled dace): 130103527
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Entry
130103527 CDS
T09701
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04141
Protein processing in endoplasmic reticulum
rkg04210
Apoptosis
rkg04217
Necroptosis
rkg04218
Cellular senescence
rkg04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130103527 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130103527 (capn2l)
04217 Necroptosis
130103527 (capn2l)
04218 Cellular senescence
130103527 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130103527 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130103527 (capn2l)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
130103527 (capn2l)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C2: calpain family
130103527 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
NRDD
Motif
Other DBs
NCBI-GeneID:
130103527
NCBI-ProteinID:
XP_056125748
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSGIASKLQQNRARAAGFGTNAQAFKFLNQDYEALKRECLECGRLFQDDTFEANTSALGF
KELGPNSSKVRGVEWMRPKQLTSNPAFISGGATRTDICQGALGDCWLLAAIASLTLNQDV
FGRVVPSGQNFDEGYAGIFHFQFWQYGEWVDVVIDDRLPARKGELLFVHSAEGSEFWSAL
LEKAYAKLNGSYEALSGGTTTEGFEDFTGGIAEVHELAKASPNLFKTIQKALSWGSLLGC
SIDITDSADSEAITSQKLVKGHAYSLTGAEEVEYRGDLTKLVRIRNPWGQVEWTGPWSDG
STEWRQVSDSDREKLSSKAEDGEFWMSYSDFLRHYSRVEICNLTPDALSDDSVNKWALSK
FDGNWRRGSTAGGCRNFPNSFFMNPQFLIKLDEEDDDPADNEVGCSFVVGLIQKNRRKMR
KVGEDMHTIGFAIYEVPQEFVGKRNAHLDRNFFVRHGSAARSETFINLREVCSRFCLPPG
EYLIVPSTFEPNKDGDFCVRVFSEKQAEFQELDDPVECKVPEIDVKEGDIDGRFKSLFGQ
LAGADAEISPFELQNILNKVISRRKDIKTDGFSLDTCRNMVNLLDKDGSGKLGLIEFKIL
WTKIEMYLDIYCKIDMDKSGTMSSSEMREAVEKAGFSLSNPLHQILVARYSDSNLTIDFD
NFVACIMRLECMFKIFKMLDKDKNGTVELNMMEWLNFSML
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaattgcgtcgaagctccagcaaaacagggctcgagcagcgggcttcggtacc
aacgctcaagcgttcaaattccttaaccaggactacgaggcgctcaagcgcgagtgtctg
gagtgcggacgcttatttcaggatgacacgtttgaagccaatacatctgcgctcgggttc
aaggaactgggaccaaactcctctaaagtgcgcggggttgagtggatgagaccaaagcaa
ctgacgtccaacccagcgttcattagtggaggagcgaccagaacggacatctgccagggt
gctttgggtgactgttggcttctagctgccatcgcttctcttaccttgaaccaggacgtc
ttcggccgcgtcgtcccgtctggtcagaattttgacgaaggctacgctggaatatttcat
ttccagttctggcagtacggtgaatgggtggacgtggtcatcgatgaccgtctgccggca
agaaaaggagagttgctgttcgtccactccgccgagggctctgagttttggagcgctctg
ctggaaaaggcctatgcaaagctgaatggcagctatgaggctctctctggtggcaccacc
acagagggatttgaggatttcaccggaggcatcgctgaggtccacgaattggcgaaagca
agtccaaatctcttcaaaaccatccagaaggctttgagctggggctcactgctgggctgc
tcaattgacattacagacagtgcagattcagaggcgattactagtcagaaactggtcaaa
ggacacgcctactctcttacaggagccgaagaggtggagtacaggggcgatttaaccaaa
ctggtccggatcaggaacccctggggtcaggtggagtggaccggaccctggagtgatggg
tcgacagaatggcgtcaggtcagtgacagtgaccgtgagaaactgagctccaaagcagaa
gatggagagttctggatgtcatactctgatttcctgcgtcattactcgcgggtggagatc
tgcaatctgacccctgatgctctgtcagatgacagcgtcaataagtgggcgctgtctaag
tttgatggcaactggaggagaggatctactgctggaggctgcaggaacttcccaaactcg
ttctttatgaaccctcagttcttgatcaagctggacgaggaggatgacgacccggctgat
aatgaggtgggatgcagcttcgttgtgggtctgatccagaagaaccgtcgcaaaatgaga
aaggtcggagaggacatgcacaccattggcttcgccatctacgaggttcctcaagagttt
gtcgggaagaggaacgcccacctggatcgtaacttcttcgtgcgacatggctcggcggcc
cgttcggagaccttcatcaacttgcgggaggtgtgctctcgtttctgtctgccccccggc
gagtatctcatcgtcccgtccacctttgagcccaacaaagatggagacttctgcgtgcgc
gtcttctccgaaaaacaggcagagttccaagagcttgatgaccctgtggagtgcaaggtt
ccagagattgatgtgaaagagggtgatatcgacggccggttcaagagtctgtttggacag
cttgctggggccgacgctgaaatctcaccatttgagctgcaaaatatcctgaacaaagtg
atatctagacgcaaagacattaaaactgatggatttagtttggacacttgccgcaacatg
gtcaacttactggataaagacggcagtggaaaactgggcttgattgaatttaaaattctc
tggactaaaattgagatgtacctggacatttactgtaaaattgacatggacaagtcaggc
acaatgagctcttcggagatgagagaagccgtagagaaagcaggcttctctctgagcaac
cctctacaccagatcctggtggcgcgctacagcgactccaatctcaccatcgactttgac
aacttcgtggcctgtattatgcgtctcgaatgcatgttcaaaatatttaaaatgctggac
aaggacaagaatggcacagtagagctgaacatgatggagtggctgaatttttccatgctt
tga
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