Rhinichthys klamathensis goyatoka (western speckled dace): 130103570
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Entry
130103570 CDS
T09701
Symbol
sox12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130103570 (sox12)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130103570 (sox12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130103570
NCBI-ProteinID:
XP_056125798
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MTLGNLLNRSQRCIMVQQRTHKYLSVMDSNSTREVFVGLAAEDDAEVFGEVPSNKDPNWC
KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEA
ERLRLKHMADYPDYKYRPRKKSKCSTPVKLGEKLPMKSSKPHSGRSSGLSCKGLKIKPAS
TKHKMNFNGNKYKSYSESMSDDDTMDVNLESPVTLQDDHNPSSHFVLHQQATVPSEDQQP
VPELRVKVPISQTSSIQSLSSDSECQAPPDSTMSEPQGSTSGRSSTPTSTSSSSLVSSAC
SDEELDEELLHIISNSMPMDCSALDKDFEAFHANSGSHFDFPDYCTPEVNEMISGDLLVP
SISDLVFTY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactctagggaacctactgaatagatctcagcgctgcatcatggttcagcaaagaacc
cacaaatacttgtcagtcatggacagcaattctaccagagaggtgtttgtgggactggcc
gcagaagacgatgctgaggtgtttggagaagtaccttctaacaaagatcccaactggtgc
aaaactccaactgggcacatcaaaagaccaatgaacgcttttatggtctggtcccagatt
gagagacggaagattatggaacagtggcctgacatgcacaatgctgagatttcaaagcgc
ctcggaaagcgctggaaactactgcccgattatgagaagatacccttcatcaaagaggcc
gaaagattgcgcctaaagcacatggctgactatcctgactacaagtaccggcccaggaaa
aagagcaagtgctctacccctgtgaaacttggcgagaagttgcctatgaaatccagcaag
ccccattcaggaagatctagtgggctctcctgcaaagggctaaagatcaaacctgcttct
accaagcataaaatgaacttcaatggcaataaatacaagagctacagcgagagcatgagt
gatgacgacacgatggatgtaaacttagaaagtccagtgactctgcaagacgatcacaac
ccgtcaagtcactttgttcttcaccagcaggccaccgttccctctgaggaccagcaacca
gttcctgagctcagagtgaaagtgcccatctctcaaaccagcagcatccagagtctctcc
tcagacagtgagtgccaggctcccccggattccacgatgagcgagccacaagggtcgaca
tctggaagatcctccacaccgacctcaaccagctcctcctctttggtgtcatcagcctgt
tcagatgaggaactggacgaggaactcttgcatatcatttctaatagtatgcctatggac
tgttctgctctggacaaggactttgaagcatttcatgccaactcaggatcccattttgac
ttcccagattactgcactccagaggtgaatgaaatgatttctggggacttgcttgtgccc
agtatctcagacctagtgttcacctactga
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