Rhinichthys klamathensis goyatoka (western speckled dace): 130103624
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Entry
130103624 CDS
T09701
Symbol
si:ch211-222f23.6
Name
(RefSeq) nectin-3
KO
K06592
poliovirus receptor-related protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
rkg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130103624 (si:ch211-222f23.6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130103624 (si:ch211-222f23.6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130103624 (si:ch211-222f23.6)
04090 CD molecules [BR:
rkg04090
]
130103624 (si:ch211-222f23.6)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Nectin family
130103624 (si:ch211-222f23.6)
CD molecules [BR:
rkg04090
]
Proteins
130103624 (si:ch211-222f23.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
Ig_2
ig
C2-set_2
I-set
Ig_4
Motif
Other DBs
NCBI-GeneID:
130103624
NCBI-ProteinID:
XP_056125888
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MHGRRNACDLSLYGLVLIYLKCSSIAGVKIMGHDTTVMEGGNATLFCHLTETEENLTRIV
WQKQTRGIHEKHSFFIIHKDGKTEHKNYLKDTVRFIGNFKENNGSIQLLGLSLLDDGIYT
CIFNTFPSGQILTNINVTVHVPPAVKVMGSTHFSDHYDVTLASCVASNARPAAEVLWRLG
ALDDSLRTETSCTQHSDGTVTVVANILGAPSKHLNQKKIQCVVKHSTLTKQLELDYVINV
HYPPELVVIIPDDPTEAEEYHCLVDCNPAPTSYIWIKVNGSTPHSEGNKLFIPKSSSDVN
GVYVCTASTGYGSVSGVLYVDNTGSTDVCWDLLGFISSCAILGFTVVFILLSVSRSKVLL
KQMTGHGTVRSPGKNRLQQASGANPCGEDYLIGLPPP
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggagaagaaacgcttgcgatctgtcactctatggtctggttttgatttatctc
aaatgctccagcatagcgggtgttaagattatgggccatgatacaacagtcatggaagga
gggaatgccactttgttttgtcatctgactgagacggaggagaatttaactcgtatcgtc
tggcagaaacagacaagagggatccatgagaagcacagcttctttatcatccacaaagat
gggaaaactgaacacaaaaattatttaaaggacacggtcagatttattgggaactttaaa
gagaataatggatcgattcagctgctgggactgtcgctcctggatgatgggatctacact
tgcatcttcaacacatttccgagtggacaaattctgacaaacattaatgtcacagtacat
gttcctcctgctgtgaaagttatgggaagcacacatttttctgatcattatgacgttact
ttggcgtcatgtgtagcctcgaatgcacggcctgcagcagaagtgttgtggcgattagga
gctctggatgactctctgagaacagaaaccagctgcacacagcactcagacgggaccgtc
actgttgtggccaacatactgggtgctccatctaaacatttaaaccagaagaagatccag
tgtgttgtaaaacacagcacactgacaaagcagcttgaactcgactacgtgataaatgtc
cactatcctccagaattggtggtgataatccctgatgatccaacagaggctgaagaatat
cactgtttagtggattgtaacccagcaccgactagctacatctggatcaaagtgaatgga
agtactccgcattctgaaggcaataaacttttcatcccaaaatcttcctctgatgtgaat
ggtgtgtacgtctgtacagcatcaaccgggtatggaagtgtgtcaggtgtgctctatgtg
gataacactggatccactgatgtctgttgggatctgttgggttttatctccagctgtgcc
atcctgggatttactgtggtttttattctgctcagtgtctcgaggtctaaagttctactg
aagcaaatgacaggacacggaacagtgaggagcccagggaagaaccgattgcaacaggcg
tcgggggccaacccctgcggtgaagactacctcataggccttccccctccctag
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