Rhinichthys klamathensis goyatoka (western speckled dace): 130103691
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Entry
130103691 CDS
T09701
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130103691 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
130103691 (pdzd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130103691
NCBI-ProteinID:
XP_056125961
LinkDB
All DBs
Position
Unknown
AA seq
2464 aa
AA seq
DB search
MPITQENALNHLPLLENWLRAREKDRDEGDESRMSAGGVCQAAICKLVEYIQLNFAEVES
PLYSSSPFREETDAEVKAVYLNKSEEDGPEFGLSFGNIPIFGDPEGKKKGVRRRRRKCDK
GPVLDVGCIWVTEVKKNSPAAHCGDIKLRDELLSLNGQLMVGVDVTGASYLADQCWNGGC
IYLIMLRRIKRKAPLPPCNGNNGGNCVDVSKEHRRNVSDKPVGSPTQNGQNGKRTRKFGV
ISRSSFTRDSKDSKDSRDFEHENGYSSMEATSPESSSPQDTPTDDCPVIGSSELISNRLK
VGSTATLPSRSHSRYKTESISSEPSSQPCEGSQIWKMHMVKGQDGLGIQITGGRGSKRSP
HGIIVAHVEEGGAAQRDGRLKAGNELLMINGHSLVGLSHQEAVAILRSTAGLVQLVVASR
DESEVDFHKYPSTSLPDLVSTCSGPDASPSPGEEKENMEPDMEDVRASSLSLPTQDLFTD
LDRLEEHGRIEGPKGCRSPTPMKFRSRSQGGGSRLESVGEDDELIVENGDTGSDVAEKPV
RGGRKHSLPQQLDTVGIRQEYQIVKKSARSLSTVQVESPWRLAQPSIISNIVLMKGQGKG
LSFSIVGGQDSARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGESLQGLTHQQAIQT
FKQLKKGVVTLTVRTRLRSPSLTPCPTPTLLSRSSSPNSNASGGTPVPTSFEEGDSRRGP
GPKDRIIMEVTLNKEPGVGLGIGACCLTLENSAPGIYIHSLAPGSVAKMDGRLSRGDQLL
EVDSVSLRHAALSEAYAILSECGPGPVSLIISRHPNPKVSEQEMDEVITRSTHRDSHSSH
TLGLPSKSPSPTVKVKQGEGNPALSWTMKRFLEPASRQGSLSSEAELSQYFSVHDVPSQS
SLSETMAMGSSDDDMLHCSRSCITSMEESAAPQSHVFRDGSTRGSDSSPTTPECCKASGR
AGRTVDTAQQASVGSSPSSVRSPLLRQRRVICYEDEPSDDETGLEEDSGPFRRRLRGVSE
AGHHHHQEDDSGIVIATSSLEVDDESQDSSESHRQIGSESATPIYGSSLESEEGPSGPPG
AESPFMPIRCVEAAGGTNLGIKKEPHREGLEVKRSPKLEHKAVTRVKSMMSIECPSPPQK
AKGEEPPLLPATPVQVTQNSTRPPCRMLHCKKGESSELAGVCTIETIVLQRGETESFGLD
LEIKSAPLKVLITGLRPGGVAEREASGKMSVGDEIVTICDIPVCTSTYQEICDLMHNLPI
TLNLEIKKPVSAVDRLSSLIMSSGCEGSSKLEAPRSPPEERNHMDKTSVVAQESPSSETN
AKQALAIHNNSMAVTNIDDVIAELNSSESQEKDQNVLGYTDTIATEECSKVDDRETAAPS
QPNLDFSALDLGNNAFHFPVGKTFLNGYSRNFSNLAEDVVPLEKDHGEKPSMYSLVEDSD
SESDSAVSAVKIEMSQGHCEGPQDTDSDEEEVELCISTVSQPAFSQSEGSTLQERNSIDS
SQTVDKTFASMDRHNSPSPSAQDKDSQENNHSLLKLPDPLCPQVLDDVLLNGDSGHTLTQ
QEEMCASQRILSNCNTDEKWETILKPVQICQTPTGVTCSPVTQRNCHVTPRSQERTAKLL
SDASQFSEKLNTGQVPLRSTVSEPKASNYTSGKTSEQVSSTLAPKDKERETVHPILDLKL
SLSQNQSKSTTCCVRSLGTKTPNDTPVSPLLRSRLKVDDKKSNTSSKLKGLSIKSKSKDQ
EQAVTRSPRAESPVQKKALSSPSQSPKLHSKRTTPTGSPKLTRPSEKIRVSSCKTDKSQP
TVSSTLKANPINTTKEELKPSKKELVLDLKEQVSKSEVTVVSTQRTFIEVRLSSSSSSTP
VLMRKEVVNASHLSLASVPVDQVDWKASSSDPSLGSHTIPLESTNTSSSCPQHSGANKAN
ETAEKMHCNGQEESLFRNSNNKDAASSLKSNKSKLYLRGLERRSCSTDTSGSLDPNPFSV
RQRIQSFENLASFDRSVVRCIDIPFYAINSKSPLNRRFSGYAGSVSSQSSDSRSLRRSFS
SCVDSLSSTPSLPYPQNVSSSSTNSESTPLNQTTEAVMKEKVRNKSSQNQATVNTPPVLR
SRNARAHGGLSRSKLREIRALSMPELDKLCSEDFTSDPGNVIFKTELEIHPCRSIDTAPH
SLQCTMMTRVSSVDTGALGSTSNGEQHEGQVTGLSCWSISLKDLESSPLDQNKVQDLLCS
LTTKVNVTSLIQETKTLSEVKDDIYFVILTKEQGSGLGFSIAGGVDLEQKSITVHRVFTR
GVAGVEGTIHRGDRVLSINGTRLSGITHGEALSCLHQTRLPRQALVIIQKDMNTEPTSTR
QELPLQTVVCPSPGHRVSIREHKTSVEVGPDGALSVELQKTTAGLGFSLDGGKASGHGDR
PLYIKRIFCGGVAEQSRVIDVGDELLAINGRSLQGLMHYDAWNIIKTVSEGPVQLVIRKP
RTSV
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcacccaagaaaatgccctgaaccatctccccctcctggagaactggctcagg
gctcgagaaaaggaccgagacgagggcgatgagtctcggatgagcgcagggggtgtttgc
caggctgccatctgcaagcttgtggaatacatccagctaaactttgctgaagttgagagt
cctttgtacagtagtagcccatttagagaggaaactgatgctgaagtgaaggcggtctac
ctgaacaagtctgaggaagatggaccggagttcgggctcagctttggaaatattcccatt
tttggagaccccgaggggaaaaagaaaggggtcaggaggaggcgcaggaagtgcgataaa
ggccctgtgttggatgtcgggtgtatttgggtgactgaagtgaaaaagaacagtccagca
gcccactgtggagatattaagctgcgagatgagctgctgtcactaaatggacagctgatg
gttggggtcgacgtcactggagccagttacttggcggaccagtgctggaatggaggctgc
atctacctgatcatgttgcgaagaatcaaacgcaaagctcctctccctccatgcaatggc
aacaatgggggcaactgcgtggacgtctctaaagaacaccggcgcaatgtctccgacaag
cctgttggcagccccacacagaatgggcaaaacggaaaacgaacccgcaaatttggcgtt
atttcccgctcctcgttcactcgcgacagcaaagacagtaaagatagccgggactttgag
catgagaatggctacagctccatggaggcaacatccccagagagcagctcccctcaggac
acaccgaccgatgattgtccggtcattggctcctcagagttgatttccaatcgcttgaag
gtggggagcacggccaccctacccagccgatcccactcacgctacaaaactgagtccata
agcagtgaaccttccagtcagccctgtgagggcagccagatctggaagatgcacatggtg
aagggtcaagacggactgggtatccagatcacgggcggtcgagggtccaaacgctctcct
cacggtatcatcgtggcccacgtggaggagggaggagctgcacagagagatggccgtctg
aaggcaggcaatgagttacttatgataaacggtcactcccttgttggactctcacaccag
gaggctgtagccatcctgcgctccactgctggactcgtgcagctggtggtggccagcagg
gatgaatccgaagtggacttccacaagtacccgtccaccagcttgcccgacctagtgagc
acgtgctcaggtccggacgcctctccctcccccggggaggagaaggagaatatggagccg
gacatggaggacgtgagggccagcagtctttcactgcccacccaggacttgtttacagat
cttgacagactggaggaacatggcaggattgagggtcccaaaggatgccgaagccccaca
ccgatgaagttccgtagcagatcccaaggtggagggagccgcctggagtctgttggcgaa
gatgatgagcttatcgtggaaaatggtgatacaggaagtgacgtggccgaaaagccagtg
cgaggaggacgcaaacattccctcccacagcagctggatactgttggaatccgacaggaa
tatcaaatcgtgaagaaatcggcccgttccctgagcactgttcaagtggagtctccatgg
cgactggcacagccatccataatctccaacattgtcctgatgaaaggacagggcaagggt
ctcagcttcagtattgtcggtggccaggattcagcccgggggaggatgggtatattcgtc
aagaccattttccccaatggagcagctgcagcagacgggaggctgaaagaaggtgatgag
atattggaggtcaatggagagtctctccaagggctcacgcaccagcaggccattcagacc
ttcaagcaactgaagaagggggtagttaccctaacggtgaggacccgtctgagaagcccc
agtcttacaccctgtcccacgccaacccttctcagcagatccagctctccaaactcaaat
gccagtggtgggactccagtccctactagctttgaagagggggactctcgtaggggtcct
ggtcccaaggatcgcattatcatggaggttacattaaacaaagagccaggtgtggggctg
ggcatcggtgcctgctgtctaacactggaaaacagtgctcctgggatctacatccacagc
ttggcaccaggttctgttgccaaaatggatggcagactcagtcgaggagaccagcttctg
gaggtggattctgtgagcctgagacacgctgcgttgagtgaagcctacgctatcctgagt
gaatgtggacccggcccggtcagcctcatcatcagccgacatccaaaccccaaagtgtct
gaacaggagatggatgaagtgatcactcgctccacgcacagagatagtcattcttcccac
acacttggtctgccgtccaagagtccatctcccacggttaaagtcaagcagggtgagggt
aatcctgctctcagctggaccatgaagagattcctagagccagccagcaggcaaggctca
ttgagttcagaggcagagctctctcagtatttctcagttcacgatgtacccagccaatct
tccctctctgagaccatggcgatgggatccagtgatgatgacatgctgcactgtagcagg
agctgtattacgtccatggaggaatcagcagcacctcagtcgcatgtctttcgggatggt
tccactagaggttcagatagtagtcccactaccccagaatgttgtaaagcttctggcagg
gctggtcgcaccgtagacacggcccaacaggccagcgtgggaagcagcccgagttctgta
cgtagcccacttttacgtcagcgccgggtcatctgctatgaggatgagcccagtgacgac
gagaccggtcttgaagaagacagtggccccttccgtcgccgtctccgtggggtctcagag
gccggccaccatcaccaccaggaggacgactctggtattgttatagccacatcatctctt
gaagtcgatgatgaaagccaggatagtagcgagagccacagacagataggcagcgagtca
gccactccgatctacggcagctcgcttgaatctgaggaaggacctagcggccctcctggt
gccgaatctcccttcatgcccattcgctgtgtggaggcagccggaggaacaaacctgggc
atcaagaaagaaccccatcgagaagggctggaggttaaacgctcacccaagctggagcac
aaagccgtgactcgtgtcaagagcatgatgagcattgagtgccctagccctccacaaaag
gccaagggtgaagaaccacctttactcccagcaacccctgtccaggttacacagaatagc
acacggccgccctgcaggatgctgcactgcaagaagggtgaatccagcgagctagcaggg
gtctgcaccattgagacaatagtgctccagcgtggtgagaccgagtcttttggtctggat
ctggagattaagtccgctccactcaaggtgctgatcacagggctgagaccaggaggtgtt
gcggaaagggaagcctcagggaaaatgagcgttggtgatgagattgtaacaatttgtgac
atccctgtgtgtacatccacctatcaggagatctgtgacctcatgcacaacctgccaatc
acattgaatttagagattaagaagccagtctcagctgtagatcgactttctagcttgatt
atgtcctctggctgtgagggctcatcaaaattggaggcacctagatctcctccagaggaa
aggaatcatatggacaaaacttcagttgtggctcaagaaagtccatcatcagaaacaaat
gcaaaacaggcattagcaatccacaacaacagcatggctgtcactaatattgatgatgta
atagctgaactgaactcatcagaaagccaagaaaaagaccaaaatgtattgggttataca
gacacaattgcaacagaagagtgcagtaaagtagatgacagagagactgcagcgccatca
caaccaaacctggatttctctgcactagatctggggaacaatgccttccattttccagta
ggaaagacatttttaaatggttactcaagaaactttagtaatctggcagaggatgttgtc
cctctagagaaagaccatggagagaaaccaagtatgtacagtctggtggaggatagtgac
tctgagagcgactctgcagtcagtgctgtcaaaatagagatgtctcaaggtcactgtgaa
ggtcctcaggacactgactcggatgaagaggaggttgagctctgtatcagcactgtcagt
cagcccgcattcagccaatcagagggcagtactctgcaagaaagaaatagcattgacagt
agccagactgttgacaagacatttgctagtatggatcgccacaattctccatccccctca
gcgcaagacaaggattcacaagagaacaatcattcactccttaagttacctgacccgctt
tgtcctcaagttttagatgatgttcttttaaatggggatagtggacacactctcacacaa
caggaggaaatgtgtgcatctcagagaatactatcaaactgcaacactgatgaaaaatgg
gaaaccattttaaagcctgttcaaatctgccagacaccaacaggtgtcacttgttcccct
gttactcaacgcaactgccacgttaccccgagaagtcaagagaggactgctaagttgctc
tcagatgcatcccaattctcagagaaacttaacactggacaagtgccactgaggtcgact
gtgtcagagcccaaggcatcaaattataccagtggcaaaactagtgagcaggtctcctct
acgcttgctccaaaagacaaggagagagagacagttcatcccatacttgacttgaaatta
tccctctcccagaaccagagtaaatccaccacgtgttgtgtcagatctttaggaacaaaa
acccctaatgacactcctgtctcgcccctgctgagaagtagactcaaagttgatgataaa
aagtcaaacacctcttctaaactcaagggtctaagtattaaaagtaaatccaaagaccaa
gaacaggctgtcactagatcgcccagggccgaaagtccagtacagaaaaaagctctcagc
tccccaagtcagtctcctaaactccactccaaaagaaccacaccaactggtagccctaaa
ttaaccagaccttctgagaagatcagggtttcttcttgtaaaactgacaaaagtcagcca
actgtgtccagtaccttgaaggcaaatcccatcaacacaaccaaagaagaactcaagcct
tccaagaaggagctagtcttggatttaaaggagcaagtctcgaaatcggaggtcactgtt
gtcagcactcaaagaactttcattgaggtacgactttcttcctcttcatcgtctacacct
gtgctcatgcgcaaggaagtcgtgaatgcaagtcatttaagcttggcctcagtaccggtt
gatcaagtcgactggaaggcatcaagttctgacccctctcttggaagtcacacaatccca
ttagaatcgaccaatacttcatctagttgtccacagcatagtggtgctaataaggcaaat
gaaactgctgagaaaatgcattgtaatggccaggaagaaagtctctttaggaactcaaat
aataaagatgctgcttctagtctcaagtcaaacaaatccaaactgtacctaaggggacta
gaacgcaggagctgctctacagacaccagtgggtctcttgacccaaaccccttctcagtt
cgtcaaagaatccagtcctttgagaatctggccagctttgatcgatctgttgtaaggtgt
atagacattccgttttatgctattaattccaagtcacctctaaaccggaggttttctggg
tatgctggatctgttagcagtcaatccagtgacagtcgttctttgaggaggagtttcagc
tcctgtgtagacagtttgagctcaactccatctctaccatatccacagaatgtgtcttct
agttccaccaactctgaatccactcctttgaaccaaaccacagaagctgttatgaaagag
aaggtaagaaataagtcctctcagaaccaggccaccgtaaacacgccaccagtactgcgc
tcccgtaatgcccgtgcccatggaggcctgtcacgctccaaattgagagagataagggca
ctgagcatgcctgaactggacaagttgtgttctgaggattttaccagtgaccctggaaat
gtgatctttaagacggagctggaaatccacccttgcagatccatagacacagcaccacac
agcctgcagtgcactatgatgaccagggtgagcagtgttgacactggggctcttggttca
accagtaatggagagcaacatgaaggccaggtcacggggttatcatgttggtctataagt
ttgaaagaccttgaatcttctcctttggaccaaaataaagtgcaagatcttctgtgttcc
ctcacaaccaaagtgaatgtgaccagtctcatacaggaaacaaaaactctttcagaggtt
aaagatgacatttactttgtgatcttaaccaaagagcagggatctggactgggtttcagc
atcgctggaggagtagatctcgagcagaaatctattactgtccatcgagtgttcactcga
ggggtggcaggagtggaaggtaccattcacagaggagatagggttttgtcaataaacggg
accaggttgagtgggatcacacacggagaggcgctgtcctgccttcatcaaaccagactg
ccaagacaagcattagtgatcatccagaaagacatgaacactgagccaacatcaactaga
caagaacttcctcttcagactgtcgtctgcccttctcctggccatagagtcagcatcagg
gaacataaaacaagtgtggaagtggggccagacggggctttgagtgtggagttacagaag
accacagctggtctagggttcagtctagatggaggcaaagcatctggccatggagatcga
cctctctacataaaacgcattttttgtggaggagttgctgagcagtcccgggtcattgat
gttggagatgaacttttagccatcaacggcaggtctttgcaaggccttatgcactatgat
gcctggaacatcattaaaacggtctctgagggtcctgttcagttagtcatcagaaaaccg
cggacttcagtatga
DBGET
integrated database retrieval system
