Rhinichthys klamathensis goyatoka (western speckled dace): 130103735
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Entry
130103735 CDS
T09701
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130103735 (zfr)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130103735 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
130103735
NCBI-ProteinID:
XP_056126010
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPTAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYAGYQPAHAATDYGYAQRQQE
VPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPVATPAVAAAAAQPQQTVAESYY
QTAPKTGYSQGATPYTQTQQTRQVTTIKPATPSPATSTFSIYPVSSAVQPAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAVAAAATAAWTGSTFTKK
TPFQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSSS
SGGGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSVV
SQSSTSSTAAPNKTASSNINSSTSTSSNLSASSVSASYLKSNSMVNNMASAAQGKSAVPN
SVSVNSTSVKKVNTPKINFVGGNKLQTTAVKNDESKIEAAKTAQSAPPPDGKNEMLDPMS
PQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQ
YKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWR
RMEEEHHWDERRRMPDGGYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDRYVMT
KHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDTTVKGNEEDKEKKEPPKDRVLKG
VMRVGVLAKGLLLRGDTHVNLVLLCSEKPTKNLLTRIVEHLPKQLTIVTPEKYEVKGSIQ
EAAIILTSCTESKMQVTITLTSPVIREENPRDGDVTSSMVKDPADVLDRQKCLDALAALR
HAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPMSPGDA
LRRVFECISSGILLSGAPGLIDPCEKNPTDTLASMEEQQREDITSSAQFALRLLAFRQIH
KVLGMDPLPQMNSRFNVRNNRKRRRDNSDGTDGFEAEGKKDKKDYEGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggccaccggcaactactttggatttacccacggtgcggcggcccagtacagt
cagcagccgaccgctggggtagcatacacccaccccactacagtggccagctatactgtg
catcaagcaccggtggcggcgcacactgtagcggcagcatacgcccctacagccgccacg
gttgctgttgctaggcctgcaccagtcgctgtagcagctgcggctactgctgctgcttat
gcaggataccagccagcccacgctgccacggattacgggtatgcacagagacagcaggag
gtacccccaccaccacctccggtcacctcacaaaactaccaggactcctattcatatgtg
cgttccacagctccggctgtagcatatgacagtaaacaatactaccagcaacctgtggct
acaccggctgtggctgctgcagcagcccagccgcaacagactgtggccgaatcctactat
cagaccgcacctaaaactggatacagccaaggcgccactccttacacccagacccagcaa
acgcgtcaggttacaaccataaagccagccacccccagccctgccacctcaaccttctcc
atttacccagtgtcctctgctgtacagccagctgcctctgtagtcccatcatactctcag
agtcccacctacagcaccaatgcagtcacatactctggaacatcatactctggctatgaa
gctgcagtgtattcggctgcttcctcctactatcaacagcagcagcaacagcagcagaaa
caagcggccgtcgctgcagcagccaccgccgcatggaccggcagcacatttacaaagaaa
actcccttccagaacaaaacactcaagccgaaacagccccctaaaccaccacagatacac
tactgtgacgtctgcaagatcagttgtgcgggaccacagacctataaggagcatctggag
ggtcagaagcacaaaaagaaagaagccgcgctgaaggtatcgcagagcagcagtagcagc
agtggaggcgggagctccgcccgcggcacacagaatcagctacgctgtgagctctgtgac
gtgtcctgtactggggcagatgcctacgccgcacacatcagaggagccaaacaccagaag
gttgtgaaattgcataccaaactaggaaagccaataccatccaccgagcccagtgttgtt
tcccagtcctctacctccagtaccgcagctcccaataagactgccagctccaacatcaac
agctccacaagcacatcgtccaacctctctgcttcctcggtttctgcctcttacttaaaa
tctaacagcatggtcaacaacatggcttcagctgcacagggcaagagtgcagtgcccaac
agtgtctcggtcaacagcacctctgtcaagaaggtcaacacacccaagatcaactttgtt
ggtggaaacaaattacagaccactgctgttaaaaatgatgaatccaagattgaggcagct
aaaactgcacagtctgcaccaccaccggatggaaagaatgaaatgcttgaccccatgtca
cctcagtcagcacttgcagccctgcagagtgatgttcagcccgtcggacatgactatgta
gaggaggtaaggaatgatgaaggaaaggttatccggttccactgcaaactgtgtgaatgc
agttttaatgacccaaatgccaaggaaatgcatttgaaaggaaggagacatcgactgcag
tataagaaaaaggtgaacccagatctccaggtggaagtgaaacctagcatccgagccagg
aagatccaagaggaaaagatgaggaagcagatgcaaaaggaagagtattggagaagacgt
gaagaagaggagcgctggaggatggagatgaggcgctatgaagaggacatgtattggcgg
cgtatggaggaagagcaccactgggatgaaaggcgcagaatgcctgatggaggttatcca
cagggtccacctggacctcctggtcttcttggagtgagacctgggatgcccattcctcaa
ccacaaggaccagtgcctccacgtcgccctgattcttcggatgatcgttatgtgatgacc
aaacatgcagctatttacccatctgaggatgagctccaggccatccagaagattgtatca
atcactgagcgagcacttaagcttgtctctgacatcattactgaccaagatacaactgta
aagggcaacgaagaggacaaagaaaagaaagagcctcccaaagacagggtgctgaaagga
gtgatgcgagtaggtgttcttgccaaggggctgcttctgcgaggagacacgcacgtcaac
ctggtcctcctttgttctgagaagccaaccaagaatctgctcacgcgcattgtggaacat
ctccccaaacagctcacgatcgtaacaccggagaaatatgaggtaaaaggctccattcaa
gaggctgccattatccttacctcctgcactgagtccaagatgcaagtgaccatcaccctc
acctcacccgtcatccgagaggagaacccccgggatggagatgtaacctcgagtatggtg
aaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgccctacgc
cacgctaagtggttccaggctagggctaatgggctccagtcatgtgtcattgtcattcga
atactgcgtgacctgtgtcagcgagtacccacctggtctgcttttcctagctgggctatg
gagttgctggtggagaaggccatcagcagtgcctctggaccaatgagccctggagatgct
ctaagacgagtctttgaatgcatttcctcaggcattctgctgtctggtgctccaggattg
atagacccctgtgagaagaatccaacagatacactggccagcatggaagagcagcagaga
gaggacataacgtcaagcgctcagtttgccttgaggctgctggcgttccgtcagattcac
aaggttctgggtatggaccccctgccccagatgaactcgcgcttcaacgtgcgaaataac
cgcaagaggcgtcgcgataacagtgatggcactgatggatttgaagcagaaggaaagaag
gacaagaaggactacgaggggttctaa
DBGET
integrated database retrieval system
