Rhinichthys klamathensis goyatoka (western speckled dace): 130103744
Help
Entry
130103744 CDS
T09701
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130103744 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130103744 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130103744 (ncor1)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130103744 (ncor1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
130103744 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
130103744
NCBI-ProteinID:
XP_056126025
LinkDB
All DBs
Position
Unknown
AA seq
2441 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSSTRHPTEFSVPDYRSPLQDQQRRRPSLLSE
FHPGTERPPERRHGYEHQFHTLSAQQDQETLDAKRPRIENVSETHFTRAQPTSILLAPSH
AIQDTIRTTGEVKKETQFSVKVETSSPGGVPQVGEDADTSPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEDEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEEAHK
ILEGLGPKVELPLYNQPSDTKVYHDNIKTNQIMRKKLILFFKRRNHARKQREQKICQRYD
ELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEIFKEKFMQHPKNFGLIASYLERKCVSDCVLYYYLTKKSQNYKTLVR
RNFGNRRNRRNQQITRPSQEDKTDEKNEEDKSEKLEKKEDEEKKEEEEKDEKEDSKYVSW
DISKDKEKCEGEEEEGKEQSTPRGRKTANSQGRRKGRITTRSMANNEASSVVAEEAPPPP
PEQVLPEPIPSSKPEPVQRPAREAAKPSLAASADTRGAVEAGETSRWTEDEMEIAKKGLV
EHGRNWSAIAKMVGTKSEAQCKNFYFNNKRRYNLDNLLRQHKGSRLRRNRDSSQSDPAPD
EDEESDGPDNSSDTESAPSPSQTDPSKSYDSLTHPNSALDGTLDLDVMATKGPVADDRGQ
EPPYGELQVKVEKSPEGGAGDGLPQDERAHLAYEMQIHPKSEPQDVEMTAPSSERGQVQV
KTEPEVKDKEEKQGEHSDNDSSATCSADEDVEVEPDRQRLFSLEKPSMLGASGSVVVSSA
NLLNMQQLRAATIPPMVSPHSLYPHLAFRYAPLDRDRAQPPRHVSAPFGHSGVSGGPLSG
FAMFQHQIKAVHESVQEDKQRLDQNESDRRPRVTTHSPTVLDREGKPFAYMPYDLKLMEQ
ESHGGVGRPGSPYRLSPREPSKASPQPDGSNATRYSVPPVLQPAPNQAAQNLSDVRMTFS
RHRPPNIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSQTHAVYVPEVVKTTAGSI
SLGLPRQQDAAKPGERQTRVSYIKQEECSPRGQSAQAEGLLSRAQYEGVVRGGPIQIQDM
RGPPGKGPEGLAYRGGSITQGTPALTQSSVAVDLLKGTIAKLATEDLSGPEKSRAEAHSK
AHVIYEGKSGHILSFDAIKNPREGTRSPRMGHDLKRTYDIMEGSPGHPGRDTAPYEGLIS
RALPRESPHESKDRSILAGSIMQGTPRTSAEVYDEASKYGKQIKRESPPIRSFEGGITKG
KPYEGVNTIKATGRSIHEIPRKETQDSRKTPVLEGPIAQGIPLKYESSTVNPSAIKHNVK
SLITSPVKISHSAIEAAERERAKYEDVKASERVRHTNSTSVLRSTHTEVGKGQLSPGMYD
DSNARRTPTYTSTSISRGSPLLRGQEGSITTGKPPSHERKSALTPTQRDSIPAKSPVSGA
DPHGSHSPFDPHHRPVVPGEVYRTHLAPHLDPSLAFHHRVLEPAAYMFQRQPSPTGYPNT
YQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREPSIGIPYPPARGIIDLAQMPP
TILLPHPGGTGSPSLDRITYIPGPQTPFPPRAFNPASISSGHPAHHSATAAIVEREREKE
RERERERERERERDQRERERAAVEYMRGGPEQPGRPGSRSFLRSTSPSVRSQEGVLQQRP
SIFQGTNTKSVITPLMQMPSQASAAQANSRYNNAADALAALVDAAASAPQMDVAKVKESK
HSNSSSRDDDMMSSRRAAQESQEVERRSMQSPYGDVSLPGGKPSHPVYAEGGGAAGSKEK
APPTKSRMEEELRTHGKTTITAANFIDVIITRQIAPDKDSRERGSQSSDSSSSMSSSRYE
AQGGIEVISPANSPALREEKNEAPFPSEKGSQPTTGMRFDISRYRQSGDSGPSAPHQPPS
SQADSYGPVPKTHRIMTLADHISHIITQDFAKSQDPPPSSTSLPSSSLSSTFQSSGMGGV
VGRVKPPNRYSPENPAPTTHHQRPPSRVSPENSSDKPRARPGRSPDRGRGLVEGSYEPIS
PPQGYSGLDKQEASMQQSQRREHEHPEQRTDSRSPGSGSYLPSFFTKLESTSPMVMSKKQ
EIFRKAEVGNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNMEEK
QEDHQQAHLGTGNTSGSMSSISESRQEASPSPNTAGRQKLQSKASSRKSKSPNPGQAYSA
GERPSSVSSVHSEGDYHRQAPTWAWEERPSSTGSMQFPYNPLTMRMLSSTPPTSMACPSP
SMQSQQQPQCGASGPVAPARAWEREPPLLSEQYETLSDSDD
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcaggatttccccccagccaggggtccttcagcagcgagcagagccgttac
ccaccacactcagtgcagtacaccttcagctccacacgccacccgacggagttctcggtt
cccgactaccgttccccactgcaggatcagcagcgccgcagaccttcattactgtctgaa
ttccaccctgggactgagaggccgccggagcgcagacatggttatgagcatcagtttcat
accctctcagctcagcaggatcaggaaactcttgatgccaagcgtccccgcatcgagaac
gtatctgaaacgcactttacaagagctcagcccaccagcatcttactggccccttcacac
gccatacaggacaccatcaggaccactggagaggtcaagaaggaaacccagtttagtgtg
aaggtggagacctcatccccaggtggagttccacaggtgggtgaggatgcggacacgtcg
ccctccaaactctctaaagaggagttgattcagagcatggaccgtgttgaccgtgagatt
gccaaggtcgagcagcagattttcaaactgaaaaagaaacagcaacaactggaggatgag
gcagcaaagccagtagagccagaaaagccagtgacgccgccccctgtggagcacaaacat
cgcagcatcgtccagatcatttatgatgagaaccggaaaaaggctgaagaagcccataag
atactggaagggttggggcctaaagtggagctgcctctgtacaaccagccctctgatact
aaagtctaccatgacaacattaagacgaatcagataatgagaaagaagctgatcctgttt
ttcaagaggaggaaccatgcacgcaaacagagggagcagaaaatttgccagcggtatgat
gagttgatgactgagtgggagaaaaaagttgagcggatggagaacaacccacgccgtaaa
gccaaagagagccgtacacgggaatactacgagaggcagtttcctgagatccgcaaacag
cgcgagcaacaggaacgcttccagagggtgggccagagggggacaggcctgtctgccacc
atcgcaagaagtgaacacgagatatccgagatcattgacggcctctcggagcaggagaac
aatgagaagcagatgaggcagttgtcagtcattcctcctatgatgtacgattccgaacag
cggagagtgaagtttatcaacatgaacggtctgatggatgacccaatgaaagtctacaaa
tcccgccagttcatgaatgtctggaccgaacacgagaaggagatcttcaaggaaaagttt
atgcagcatccaaagaacttcgggctgatagcttcatatctggagagaaagtgtgtgtct
gattgtgtgctgtactattatttgactaagaagagtcagaactataaaactcttgtcaga
cgaaattttggaaatcggaggaatcgaaggaatcagcagataacgcgaccttcacaggaa
gacaagacagacgaaaagaacgaagaggacaaatcggagaaattagagaagaaagaggac
gaggagaagaaggaagaggaggagaaagatgaaaaggaggactccaagtatgtatcatgg
gacatcagtaaagataaagagaagtgtgagggagaggaggaagagggtaaggagcagagc
acgccacgcggccgaaagactgccaacagccaaggccgacgcaaaggccgcatcaccacc
cgctccatggccaataatgaggcttcgtctgtggtggctgaagaagcacctccaccgcca
cctgaacaagttctaccagagccaataccctcttctaaacctgaaccagtgcagaggcca
gctcgagaggctgcaaaaccctctctcgcagccagcgcagacacacgaggcgcggttgaa
gctggagagacgtctcgctggacagaggatgagatggagatcgccaaaaaagggctggtt
gaacatggtaggaactggtcagccattgctaagatggtaggcactaagagtgaagctcaa
tgtaagaacttttacttcaacaacaagagacgttacaacctggacaacctgctacggcaa
cataagggttcccggctccgtagaaatcgagactcatcacagagtgatcctgcgcctgat
gaggacgaggagagtgatggtcccgacaacagttcggacacagagagtgcgccctctcca
tctcaaaccgacccctccaaatcttatgactcactaactcatcccaactccgctctggac
ggcacattggacctggatgtcatggcaaccaaaggcccggtggcagatgacaggggccag
gagcctccgtacggcgagctgcaggtgaaagtagagaagagtccagaaggaggtgctgga
gacgggcttcctcaagatgaacgagcacacttggcatatgaaatgcagatccatccaaag
agcgagccacaggatgtggagatgactgctcccagcagtgaaagaggtcaggtgcaagtg
aagactgagccggaggtcaaggacaaggaggagaaacagggggagcactctgataatgac
tctagcgccacctgcagtgcggatgaggatgtggaggttgaacctgaccgacaaagactt
ttctctctggagaagccgtcaatgctgggcgcttcaggctcagtggtcgtgtcctcagcc
aatctcctcaacatgcagcagcttcgggccgccaccatcccccctatggtcagtccccat
agcctctacccccacttagcattcagatatgcccctctggacagagacagggcccagcca
ccccgccacgtttcagctccatttggtcacagcggtgtttctggaggtccattgagcggc
tttgctatgttccagcaccaaatcaaagctgtgcatgagtctgtgcaggaggacaaacag
agactggaccagaacgagtctgatcgcagaccacgagtcaccacccacagccccactgta
ctggaccgagaaggtaagcccttcgcttacatgccatatgatctgaagctgatggaacag
gaatctcatggtggagtgggcagacctggctctccatacagactctctcctcgggagcct
agcaaagcctcaccccagcccgatggcagtaacgccactcgctatagtgtacctccagtt
cttcagccagcaccaaaccaggctgctcaaaacctttcagatgtccgcatgacgttctcc
cgccacaggccgcccaatattccatctcctccgcccctcattcccacctctaaacctaca
gacaagccctccttcattcaggggggctccatttcacagggaacgccaggaacatacctt
ccgtctcaaacacatgctgtgtacgtaccggaggtagtcaagaccacagcaggatcgatc
tcactcggcttgccaagacagcaagacgctgccaaacctggtgagaggcaaacgagagtg
tcatatattaagcaggaggagtgttctccacgtggacagagtgctcaggcagagggtctc
ttatccagagctcagtatgagggagtagtcagaggaggacccatacagattcaggacatg
agagggccacctggaaaaggcccagagggcttggcgtatagaggtggctccattacgcag
ggcactcctgccctgactcagtccagtgtagcagtggatctcttgaaaggcactattgct
aaactggccacagaggacctgagcggcccagagaagagccgagctgaagcccattctaaa
gctcacgtcatctacgaaggcaaaagcggacacatcctctcttttgacgctattaagaac
cctagagagggcactagaagcccacggatggggcacgatctcaagcgcacatatgacatc
atggaggggtcccctggacacccaggacgtgatacggcaccttatgaaggtttgatcagc
agagcattgccgagagaaagtccacacgagtctaaggatcgatccatactcgcaggatcc
atcatgcaaggaactccaagaacatctgctgaagtctatgatgaggcctccaagtacggt
aaacagatcaagagggaaagtccacccatacgctcttttgagggaggcatcacgaaaggt
aaaccatacgagggggtgaacaccataaaggcgacgggccgctcaattcatgagattccc
cgcaaggagacccaagatagtcgcaaaactcctgttctggaaggacccattgctcagggt
attcctctgaagtatgagagcagtactgtgaacccgtcggccatcaagcacaatgttaaa
tctctgatcacaagcccagtgaagatctcacactctgccatcgaggcggccgagcgcgag
agggccaagtacgaagatgttaaggcatccgagcgcgtccgacacacaaactctacgtct
gtcctgcgctccacacacacagaggtgggaaaaggtcagcttagtccaggcatgtatgac
gacagcaatgcacgcagaacccctacatacacaagcacctccatatccagaggatcaccc
ctactgcgagggcaagagggaagtataacaacaggtaagccaccttctcacgagaggaag
agcgcactgacaccaacccagagagacagtattcccgccaagtcacctgtttccggggct
gaccctcatggctctcacagcccctttgaccctcaccacagacctgtggtacctggagag
gtgtaccggactcacctggcgccacacctggaccccagcctcgcctttcaccacagagtc
ctggaaccagcagcatacatgttccaacggcaaccgtcgcctacaggttaccccaacact
taccagctgtacaccatggagaacactcggcaaaccattctgaacgattacatcacctcg
cagcagatgcaggtcataccgcgccctgatgttgcgaggggactgtcaccacgtgaaccg
tccattggcatcccatacccaccagctagaggaataattgatctagcccagatgccacct
accatcctgttacctcaccctggggggacaggttccccctccctggaccgcatcacctac
atccctggacctcagacccctttccctcctagggcattcaaccctgcctccatatcttca
ggacatcctgcccatcatagtgccactgcagccattgtggagagggagcgagagaaggaa
cgtgagagggaaagagaacgggagcgagaaagagagagagatcagagagaacgggaacgc
gccgcagtagaatatatgcgtggaggtcctgaacagcctggccgaccaggcagccgtagt
ttcctgcgttccacctcaccctccgtgcgatcacaggagggcgtcctccagcagcggccg
agcatcttccagggcaccaacactaagagcgtcattaccccactcatgcaaatgccctct
caagcatctgcagctcaagccaactcccgatacaacaatgcagctgacgccctcgccgcc
ctggtggacgctgctgcctctgccccgcagatggatgttgcgaaagtcaaggagagcaag
catagtaacagtagctcccgggatgatgacatgatgtcatcacggcgggcagcacaggag
tcacaggaggtggagcgccgttccatgcaatcgccatatggggacgtgtcacttcctggt
gggaaaccttcccatcctgtgtatgcagagggtggaggagctgcagggagcaaagagaaa
gccccacctacgaagtcacgcatggaggaggagctgcgcacgcatgggaagaccaccata
actgctgcaaatttcattgatgtcatcatcacacgccagattgccccagataaggattcc
cgtgagagaggctcacagagctctgactcctccagcagcatgtcatccagtcgttatgag
gctcaagggggaattgaggtgatcagccctgctaactctccagccctgagagaagagaag
aatgaagcacctttcccatcagaaaagggctctcagccaaccacaggaatgaggtttgac
attagccggtacaggcagtcaggagattcaggaccttctgcaccccaccagcccccctcc
tcacaagcagacagttatgggcccgtccctaaaacacaccgcatcatgaccctcgctgac
cacatttcacacattattacacaagactttgccaagagccaggatcctcctccatcatcc
acttcgctgccttcctcttcactctcctccacattccagagctctggtatgggaggtgtt
gtaggtcgagttaaaccccctaaccgctatagcccagaaaacccagctccaactacacac
caccagagaccaccaagcagagtatctcccgagaactcttccgataaaccaagagccagg
ccaggcaggtctcctgatcgaggtcgagggcttgtcgagggcagctatgagcccatttct
cctcctcagggctattctgggttagataaacaggaggccagtatgcagcagagtcagaga
cgagagcatgagcaccccgaacagaggactgactcgcgctccccaggcagtggcagttac
ctgccctcatttttcaccaaactggagagcacgtctcctatggttatgtccaaaaagcag
gagatcttccgaaaagcagaagtcggtaatgctcagccaggcacagagatcttcaatctc
ccagcagtaacatcatcaagcagtgtaaaccctagaaaccactcatttagtgatccagcc
agtaatctgggtctggaggacatcatcaggaaggctctaatggggaatatggaggagaag
caggaggaccaccagcaggctcacctggggacaggaaatacttcaggaagcatgagcagc
atttcagagagccgacaggaggccagcccgtcccctaacacagctggaaggcagaagctt
cagagcaaagctagcagcaggaaatcaaagtctccgaacccaggccaggcatactctgcc
ggagagcgtccctcttctgtgtcctctgttcattcggagggtgattaccacagacaggct
cccacctgggcttgggaggaacggccgtcgtccacaggatccatgcagtttccttataac
cccctgaccatgcgcatgctcagtagtacccctcccacctccatggcctgcccatctccc
tccatgcagtcccagcagcagccacagtgtggcgcctctggccctgtggcaccggcgcga
gcttgggagagagagccaccgctactgtcagagcagtacgagaccctctcggacagcgac
gactga
DBGET
integrated database retrieval system
