Rhinichthys klamathensis goyatoka (western speckled dace): 130103749
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Entry
130103749 CDS
T09701
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04120
Ubiquitin mediated proteolysis
rkg04137
Mitophagy - animal
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130103749 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130103749 (ubb)
04137 Mitophagy - animal
130103749 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130103749 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130103749 (ubb)
Ubiquitin system [BR:
rkg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130103749 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Motif
Other DBs
NCBI-GeneID:
130103749
NCBI-ProteinID:
XP_056126049
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactggtaagaccatcacccttgaggttgagccaagt
gacaccattgagaatgtgaaggccaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgctggcaaacagctggaagatggacgcacactgtccgactacaac
atccagaaagagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccttgacaggcaagaccatcactctcgaggtcgagccaagcgacaccattgag
aatgtcaaggcaaagattcaggacaaagaaggcattccccctgaccagcagaggttgatc
tttgctggcaaacagctggaagatggacgcacactgtccgactacaacatccagaaagag
tccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttcgttaagaccctc
actggtaagaccatcacccttgaggtcgagccaagtgacaccattgagaatgtcaaggca
aagattcaggacaaagaaggcattccccctgaccagcagcggttgatctttgctggcaaa
cagctggaagatggacgcacactgtccgactacaacatccagaaggagtccaccttgcat
ctggtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccttgacgggcaagacc
atcactctcgaggtcgagccaagcgacaccattgagaatgtcaaggcaaagatccaggac
aaagaaggcattccccctgaccagcagaggttgatctttgctggcaaacagctggaagat
ggacgcacactgtccgactacaacatccagaaggagtccaccttgcatctggtgctgcgt
ctcaggggaggcatgcagatcttcgttaagaccctcactggtaagaccatcacccttgag
gtcgagccaagtgacaccattgagaatgtcaaggcaaagattcaggacaaagaaggcatt
ccccctgaccagcagaggttgatctttgctggcaaacagctggaagatggacgcacactg
tccgactacaacatccagaaggagtccaccttgcatctggtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccttgacgggcaagaccatcactctcgaggtcgagccaagc
gacaccattgagaatgtcaaggcaaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgctggcaaacagctggaagatggacgcacactgtccgactacaac
atccagaaggagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gttaagaccctcactggtaagaccatcactctcgaggtcgagccaagcgacaccattgag
aatgtcaaggcaaagattcaggacaaagaaggcattccccctgaccagcagaggttgatc
tttgctggcaaacagctggaagatggacgcacactgtccgactacaacatccagaaggag
tccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccttg
acgggcaagaccatcactctcgaggtcgagccaagcgacaccattgagaatgtcaaggca
aagatccaggacaaagaaggcattccccctgaccagcagaggttgatctttgctggcaaa
cagctggaagatggacgcacactgtccgactacaacatccagaaagagtccaccttgcat
ctggtgctccgtctcaggggaggcatgcagatcttcgttaagaccctcactggtaagacc
atcactctcgaggtcgagccaagcgacaccattgagaatgtcaaggcaaagattcaggac
aaagaaggcattccccctgaccagcagaggttgatctttgctggcaaacagctggaagat
ggacgcacactgtccgactacaacatccagaaggagtccaccttgcatctggtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccttgacgggcaagaccatcactctcgag
gtcgagccaagcgacaccattgagaatgtcaaggcaaagatccaggacaaagaaggcatt
ccccctgaccagcagaggttgatctttgctggcaaacagctggaagatggacgcacactg
tccgactacaacatccagaaagagtccaccttgcatctggtgctccgtctcaggggaggc
atgcagatcttcgttaagaccctcactggtaagaccatcacccttgaggtcgagccaagc
gacaccattgagaatgtcaaggcaaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgctggcaaacagctggaagatggacgcacactgtccgactacaac
atccagaaggagtccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccttgacaggcaagaccatcactctcgaggtcgagccaagcgacaccattgag
aatgtcaaggcaaagatccaggacaaagaaggcattccccctgaccagcagaggttgatc
tttgctggcaaacagctggaagatggacgcacactgtccgactacaacatccagaaagag
tccaccttgcatctggtgctgcgtctcaggggaggcatgcagatcttcgttaagaccctc
actggtaagaccatcacccttgaggtcgagccaagcgacaccattgagaatgtcaaggcc
aagatccaggacaaagaaggcattccccctgaccagcagaggttgatctttgctggcaaa
cagctggaagatggacgcacactgtctgactaa
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