Rhinichthys klamathensis goyatoka (western speckled dace): 130103776
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Entry
130103776 CDS
T09701
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130103776 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130103776 (trpv1)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130103776 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
130103776
NCBI-ProteinID:
XP_056126071
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MSKPKDSSTSSFTLETDDQTEEERSKAKQMKKGALKDKRPMDSNYLDDIHEPTTTIKFNL
NFDRGIRNVKEEPAQQDSGRFTIKSLFEAVSSGEVSKLQGLHQYLHKNMKRLTDSQYKSN
GKTALLKALLNLRKGENDTIEHLLDIAEKLGDLKNLVNAAYTDSFYKGQTALHVAIERRS
AKFVQMLVKKGADVHAKACGKFFQPNQEMCFYFGELPLSLAACTNQPDIVDFLMDNPYQA
VDVRERDSHGNMVLHALVSIADNSPENTEFVIAMYDHILIKAYQLHPKIKLEEIENNKGL
TPIQLAAKTGKLRLFKHIVQREFKGCRHLSRKITEWAYGPVCSSLYDLASLDTYEKNSSL
EIIVYGSEIPNRHEMLHIEPLNRLIEEKWDRFAQRMFMFKFIVYIIYLFIFTAVAYNREE
GIDHRNNQSSNPPFHYEKDTQGYLLQTGQIITLSGALYFFIRGLIDMLRKRPRFQSLVID
GYSDQLFFLQAMLLLVCAVLYCFGQDEFLAFLVLSLALSWVNLLYFSRGSKHMGIYSIMI
QKMILGEIRRFLVVYMVFLIGFSAAVVTLLDNKTTKSRSLFEASNGNEDCMKPTYKDIYF
TTLELFKFTIGMGDLEFTEDYKYKEVFYVLLILYIVMTYILMLNMLIALMNQSVEEMSVE
STSIWKLQRAITILDMEWILPHCLKTKLRSGEEKDLGGGQEPDRRWCFSVEEVNWNQWNR
NMGIINEDPGTCTSLPSTTKPQREPSQRGLLQTLSKRWTQRPPRRDVQELDPLAEASTSV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccaaaagacagcagcacctcatcattcactctggagacggatgaccagaca
gaggaggagaggtcaaaggccaaacagatgaagaaaggtgctttaaaggacaagaggccc
atggattctaactacctggatgacatacatgaacctacaaccacaattaaatttaaccta
aactttgacaggggaatcagaaacgtaaaagaggagccggctcaacaggacagtgggagg
tttaccatcaagagtctgtttgaggccgtgtccagtggcgaggtgtcgaaactgcagggt
ttacatcagtacctgcacaaaaacatgaaacgcctcaccgactctcaatataagtccaat
ggaaagacagccctgctgaaagcgcttttaaatttgaggaaaggcgagaatgacactatt
gaacatctgctggacattgcagagaaactgggagatttaaaaaatcttgtcaacgctgct
tacacagacagtttctacaaaggtcagacagcgctccatgttgcgattgaaaggaggagt
gcaaaatttgtacagatgctggttaagaaaggggccgatgtccatgctaaggcctgtggg
aaattctttcaacccaatcaagaaatgtgcttctattttggtgagttgcccttgtcgctg
gccgcttgcactaatcagccagacattgtggacttccttatggacaacccttaccaggcg
gtggatgtcagggagagggactctcatgggaacatggtgcttcacgcactagtatccata
gctgataatagtcctgaaaacacagagtttgtcattgccatgtatgaccacatcttaatc
aaagcctaccaacttcaccccaagatcaaactggaggaaatcgaaaataataagggactc
acaccaatccaactagccgccaaaacaggaaaattgaggctgtttaagcacattgtccag
cgggagtttaaggggtgcagacatctgtcccgcaagatcacggagtgggcctacggtccc
gtgtgctcgtctctgtatgacctcgcctcccttgacacctacgagaagaactcctcgctg
gagataatcgtttatggcagtgagattcccaatcgccacgagatgctccatattgagcca
cttaacagactaattgaagaaaagtgggatagatttgcgcaacggatgttcatgttcaaa
tttatcgtttatattatctatcttttcatcttcactgctgtagcatataaccgtgaagaa
gggattgaccacaggaacaaccaatcatcaaatcctccgtttcattatgaaaaagatact
caaggctacttgcttcagacagggcagatcataactctcagtggagcactatacttcttt
attagagggttaatagatatgttaaggaagcgtccgagatttcagtccctggtcatagac
ggatatagcgatcagcttttttttctgcaggccatgcttctcttggtctgtgctgtgctg
tactgctttggtcaggatgaatttctggcctttctagtgctgagtcttgccttgagctgg
gtaaacctgctttatttctccagagggtccaaacatatgggaatctacagtatcatgata
caaaagatgattcttggagaaattcgtcgattccttgttgtgtacatggtcttcctcatt
gggttctctgcagctgtggtcactctccttgataataaaactaccaagagtcgatctctt
tttgaggcttctaatggaaatgaggactgcatgaagcccacatacaaggacatctacttc
accactctggagttgttcaagtttacaattggcatgggagatctggagttcactgaggat
tataaatacaaggaggtcttctatgtgctgctgattctgtatatagtgatgacatacatt
ctgatgctgaacatgctgatcgctctgatgaatcaaagcgtggaggagatgtccgtagag
agcactagcatctggaaactacagcgtgcaatcaccatcttggacatggagtggattctt
ccccattgtctgaagacaaagcttcgctcaggggaagagaaggacctgggcggagggcaa
gagcctgatcgacgctggtgcttcagtgtggaggaagtcaactggaaccaatggaacaga
aacatgggaataattaacgaggatcctgggacatgcacgagtttaccttccacaactaaa
cctcagagagagcccagtcagcgtggactcctacaaacgctcagtaagcgctggacacag
agaccaccgcgcagagatgtacaggagctggatcctctagctgaagcctctacctccgtc
tga
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