Rhinichthys klamathensis goyatoka (western speckled dace): 130103796
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Entry
130103796 CDS
T09701
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130103796 (ddx21)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130103796 (ddx21)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130103796 (ddx21)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
Pre-60S particles
Helicases
130103796 (ddx21)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130103796 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
130103796
NCBI-ProteinID:
XP_056126096
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MSICASTPEMPSQTLPEAEPCTQMEEVENGLLLLKKKKKKMKEAVCEAEECESPAPKKRK
SEKSLEETPDENGNTDTHHIKKKKKKKAKAEAENGSAALTESVTDTHPTETAADPAHTHT
PSSEDSDSDRETETPEQKEGAFSNFRISPNTIKLLQARGVSYLFDIQVKTFNSVYDGKDL
IGQARTGTGKTFSFAVPLVEKLQSDTEDRRRGRAPKVLVLAPTRELAIQVSKDFKDVTRK
LSVTCFYGGSSYNPQVEAIRNGIDILVGTPGRIKDHLQNNKLDLSQLRHVVLDEVDQMLD
MGFAEQVEEILSASYNKDAAEKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQK
AATTVEHLAIACHWSQRASVIGDVVQVYSGSHGRTIVFCETKREATELSMSTSIKQSAQT
LHGDIAQKQREITLKGFRNGTFEVLVATNVAARGLDIPEVDLVIQCSPPNDVESYIHRSG
RTGRAGRTGVCICFYQRKEENQLLYVEQKAGISFKRVGVPTANDIVQSSSKDAVRFLDSV
PASAVEYFRAAAHELIETRGAVEALAAALAHISGATSLEQRSLMSSDTGFATMTLSCSQE
MHNIGFAWRGLKEQLGDEIDEHIRRMTFLKGKKGVCFDVPAAKLKEIQDKWQDGRRWQLS
VATELPELEQNPHLTGERTPGGFGGRGGRGGFGGRGGGGRGRGGGRSFGSKGSGGGFGGK
RGRGGAQKRSFSRAFDY
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctgcgcctcaaccccagagatgccgtcgcagaccctgcccgaagccgagccc
tgcacacagatggaggaggtggagaacggcctgctgctgctcaagaaaaagaaaaagaag
atgaaagaagcggtgtgtgaggcagaagagtgtgaatcaccggctcctaaaaagaggaag
tctgagaagagtctcgaggagactccagatgagaacgggaacacggacacacaccacatc
aagaagaagaagaagaagaaggcgaaagcagaggcagagaacggcagcgcagctctgacg
gagagcgtgacggacacacacccgaccgagaccgcagcagatccagcacacacacacaca
ccgtccagcgaggactcggacagcgaccgcgagacagaaaccccagagcagaaagaagga
gctttttccaacttcaggatctcccccaacaccatcaaactgctgcaggcgcgtggagtc
tcgtacctgtttgacatccaggtgaagacctttaactccgtgtatgatgggaaggatctt
attggccaggcccggactggcaccggcaagaccttctcgttcgcggttcctctggtggag
aagctgcagtccgacacggaggaccggcggagaggccgcgcgcccaaggttctggttctg
gctccgactcgagagctcgccattcaagtgtccaaagacttcaaggacgtcacgaggaag
ctgtcggtcacgtgtttctacggaggaagctcttacaacccgcaagtggaagcgatccgc
aacggcatcgacatactggtgggaacgccgggccgcatcaaagaccacctgcagaacaac
aagctggacctgtcccagctcagacacgtggtgctggacgaggtggaccagatgctggac
atgggcttcgctgagcaggtggaggagatcctgtccgcctcctataacaaagatgcggcg
gagaaaccgcagacgctgctgttctcggccacgtgtccctcctgggtttatgacgtcgcc
aagaaatacatgcgctctcagttcatccatgtggatctcatcgggaagaagacccagaaa
gccgccaccacagtcgagcacctggcgatcgcgtgtcactggtctcagcgggcgtcggtc
atcggtgatgtcgtccaggtgtacagcggcagccacggccgaaccatcgtcttctgtgag
accaagagagaggccaccgagctctccatgagcacgtccatcaaacagagtgcgcagacg
ctgcacggagacatcgcccagaagcagagggagatcacgctgaagggcttcaggaacggc
acgttcgaggtgctggtggccaccaatgtggcggcgcgggggctggacatccccgaggtg
gacctggtcatccagtgctcgccgcctaatgacgtggagtcgtacatccaccggtcgggc
cgcacgggcagagccggcagaaccggcgtgtgcatctgcttctaccagcgcaaggaggag
aaccagctcctgtatgtggagcagaaagcgggcatcagctttaaacgggtcggggtcccg
acggccaatgacatcgtccagtcctccagtaaagacgccgtcaggtttctggactcggtg
ccggcgtctgcggtggagtatttccgcgcggcggctcatgagctaatcgagacgcgcggg
gcggtggaggcgctagcagccgcgctagctcacatctcaggagccacgagtctcgagcag
agatcactcatgagctccgacactggcttcgccaccatgactctgagctgctctcaggag
atgcacaacatcggcttcgcctggcgaggcctgaaggagcagctgggagacgagatcgac
gaacacatccggcggatgaccttcctcaagggcaagaagggtgtgtgtttcgacgtcccg
gccgctaaactgaaagagatccaggataaatggcaggacggccggcgctggcagctctcc
gtcgccacagagctccccgagctggagcagaacccacatctcaccggcgaacgcaccccg
gggggcttcgggggacgaggaggacgaggaggcttcgggggacgaggaggaggaggacga
ggaagaggaggagggcggtccttcggctccaagggcagcggcggcggcttcggcgggaag
cggggacgaggaggcgctcagaaacgcagcttcagtcgggccttcgattactga
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integrated database retrieval system
