Rhinichthys klamathensis goyatoka (western speckled dace): 130103817
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Entry
130103817 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130103817
04121 Ubiquitin system [BR:
rkg04121
]
130103817
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130103817
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130103817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
130103817
NCBI-ProteinID:
XP_056126121
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MAESSRESNSESKKLKDAPATFKSKVWTHFGFYSSADGAKLEKDYAICKNCLAKVRYTGN
TTNLHSHLTRHHPELCEKAVVSAGSKPTHPGVNTFFQAKLPPCSARAKSITNGIAVYMCK
GLRPYSEVENEGFCFLMKILEPRFDIPSRKYFSEKIIPALYDQTRAEVESALESAERVGL
TCDGWTSRATDSYITFTVHFINEDWEMKSYVLQTRAMHETHTGSHIADVLKATVGEWNLD
AKKPVVVTDNASNMRVAMDLTGYQHVRCFAHVLNLASQRALKIAAVSKVLVKVRRISTFF
HRSTTGAEALKRNQKLLGLPLHKLITDMPVRWNSAYEMVSRFLEQQPAVCAALLSTEVRK
NVTDCALTENDISSAEEMVEALRPMLVATNIMCEEKNPTISVVAPLHAQLLRDDTTSTEE
DSPLVREIKGAINQDLSKRYQSEVEKDLLSPGP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcaagcagggaaagtaatagtgagagcaagaagttaaaggacgctccagca
acatttaaatccaaagtgtggactcactttggattttatagcagtgcggacggggcaaag
ctagaaaaggactacgcaatatgcaagaactgcttggcaaaagtccgctacacgggaaac
acgacaaacttgcacagccacctcacgcggcatcacccggagctctgtgagaaagccgtg
gttagtgctggctcgaagccgacacaccccggcgtaaacacctttttccaggcaaagcta
ccaccttgttctgcgagggcaaagtcaatcacaaatgggatcgctgtttacatgtgtaaa
gggctccgtccgtacagcgaggtggagaacgaggggttctgctttttgatgaaaatctta
gagccacgctttgatattccctctcggaaatatttttctgaaaaaattattcctgcactt
tatgaccagaccagggctgaagttgagtcggcactcgagtcggcagaaagagtggggctc
acgtgtgacgggtggacatcgagagccacggactcctacataacgttcactgtacatttt
ataaacgaagactgggaaatgaagtcatatgtcctgcaaacccgagcaatgcacgaaacg
cacactgggtcacacattgccgatgtactgaaagccacagtgggggagtggaatcttgac
gctaagaagccagtggttgtcaccgacaatgcatcaaacatgcgtgtagcaatggactta
acaggataccaacatgttagatgttttgctcatgttttaaatcttgcatcccaacgtgcg
ctgaaaatagctgctgtttccaaggtacttgtcaaagttaggaggatctcaacattcttt
catagaagcacaactggagcagaagcactgaaaagaaaccagaaactccttggcctcccc
cttcacaagctcatcacggacatgcctgttcgttggaatagtgcctatgagatggtctcc
aggtttcttgagcaacagccagctgtctgtgctgccctcttatcaacagaggtaagaaaa
aatgtgactgactgtgctctgacagagaatgacatctcaagcgctgaagagatggtggaa
gcacttagaccaatgcttgtggcaacaaatatcatgtgtgaggaaaagaatcccaccatt
tcagtggttgctcctcttcatgcccaactgctgcgagatgacacaaccagcactgaagaa
gattcccctctggttcgagagattaagggagccatcaatcaagacctttcaaagagatat
caatcagaggtggaaaaagatctcctcagccctggaccctag
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