Rhinichthys klamathensis goyatoka (western speckled dace): 130103961
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Entry
130103961 CDS
T09701
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00900
Terpenoid backbone biosynthesis
rkg01100
Metabolic pathways
Module
rkg_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130103961 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rkg01006
]
130103961 (fdps)
Enzymes [BR:
rkg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130103961 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130103961 (fdps)
Prenyltransferases [BR:
rkg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130103961 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Ntox46
Motif
Other DBs
NCBI-GeneID:
130103961
NCBI-ProteinID:
XP_056126298
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MYRKTTICVTPSVLWAVLTFHTAGEIKAHRHECVSNLSKDRFPMPMGDSRCSNGVQQKAK
MLSDAQLFDGEFEKLVSELTEQDFTDPVLTDALNRLREVLQYNAPGGKRNRGLSVIGSLR
ELVSPSELPPDEAHRALLVGWCIELLQAFFLVADDIMDASMTRRGQPCWYKKEGIGLDAI
NDAFLLEGAIYRLLRRHCRGQRYYVHLLELFTETSFQTELGQTLDLMTAPPHKIDLDRFT
MERYKAIVKYKTAFYSFYLPVAAAMYMAGIENETEHNNAKTILLEMGEFFQIQDDYLDCY
GDPAVTGKIGTDIQDNKCSWLVVTALGIMTPEQRAELEACYGRSDAESVERVKALYDTLE
MPIRYHQHEEGSYHRLQKLIQFHAKNLPHAVFLNFAKKIYKRNK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaaaaactacaatatgcgttacgccttcggtcttatgggccgtcttgactttt
catacggcaggtgaaataaaagcacacagacatgagtgtgtcagtaatctgagcaaggat
agattcccaatgccaatgggtgacagcaggtgcagtaacggtgtccagcagaaagcaaag
atgttgtcggatgctcagctctttgatggggaatttgaaaagctggtgtctgaacttaca
gagcaggacttcactgatccagttctcactgatgccctcaacagactcagagaggtgctt
cagtacaatgcccctggaggcaagagaaaccgaggcttgtctgtgattggttctttacgg
gagttagtttctccctctgaactgccacctgatgaagctcacagagcccttttggttgga
tggtgcattgaactgcttcaggcatttttcttagtggctgatgacatcatggatgcgtcc
atgacaagaaggggtcaaccctgttggtataagaaggaaggcattggtctggatgccatt
aatgacgcttttctcctggaaggggcgatctaccgccttcttcgcagacattgcagagga
cagcgctactatgtccatctgcttgagctttttactgagacctctttccagacagagctg
ggtcaaactctagatctgatgactgcaccaccacataaaatcgaccttgatcgcttcacc
atggagaggtataaagccattgtgaaatacaagactgcattctactcgttttatctccct
gtggctgcagcaatgtacatggcagggattgagaatgagactgaacacaacaatgctaaa
acaattctacttgagatgggagagttctttcagatacaggatgactacctggattgctat
ggggatcctgcagtgactggaaagatcggcacagatatacaggacaacaaatgcagctgg
ctggtggtgaccgcactgggcatcatgacaccagaacaacgggcagaactagaggcatgt
tatgggcgtagtgacgctgaaagcgttgaaagggtcaaggctttgtatgatactctggaa
atgcctatccgataccatcaacatgaggaggggagctatcaccgccttcaaaaactcatc
cagtttcatgccaagaatctgcctcatgctgtttttcttaattttgccaagaaaatatat
aagaggaacaaatga
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