Rhinichthys klamathensis goyatoka (western speckled dace): 130103970
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Entry
130103970 CDS
T09701
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38 isoform X1
KO
K10313
F-box protein 38
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130103970 (fbxo38)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130103970 (fbxo38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
130103970
NCBI-ProteinID:
XP_056126304
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MMGPRRKVTRTHSLGGGTFSSLGHEEPKDYINELSHEVLCHIFRYLPMQDIMCMECLSRK
LREAVTLYLRVVKVVDLCASRWWEYMPSGFTDSSFLMLMKKMPDLEQLYGLHPRYLERRR
VRGYEAFSIPGVLEALQACPNLIGVETSHLELVEAVWNYMPQVHILGKFRNRNGAFPIPS
ENKLTIPAAAKIQTLHLVGVNVPEIPCLSMLRHLYLKWVRLTKPQPFKDFLCVNLRTFVM
RNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIV
FGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVD
EFLLQCNMSHAELVKYGLADVIENPGIITDIGMKAVNEVFTSIKYLVIYNCPHLHNPHNW
ITDHSRWSRLVDITLVRCHAIKLESFSQFIEMLPSLEFISLDQMFREPPKGCARVGLSAG
TGIGVSSALVSNQNSNNDNDNNNNNNHQNNNDANIPPNNNNHQGEDVPQQNHRGPEEIPN
VEGMVADNMEPEPVLVAVNQEEETQGSRQTTNPSLEQDEEQAGLKKPCPSGVQTTVKKQS
VVLSDSDSEDEYSPIRTPAAARSQGQYPVTEAQGKSSTAVTPHGKGKTPLRRRGPHPQEF
SCEKGCQVTSEQIKADMKAATETARDRNSGTGPASGHAAGSCVCSIRWREDSANQDDQGE
AGRGDDDMVRTRCTCSRSRPGSENRTHSGHSLPAGDENHRPERHSPEQRAGEDETENKHS
NAPPRTHSSSEGHSERTASHQQGSSHRSPTDEFPRRPVTRARSRLSSVPLVCESELPKAK
PRAAVKRKRMADKSTSTSDPVTEDDHVQVLSLKSKNLVGITLTNCGITDLVLKECPKMMF
VHATRCRVLKHLIVESAPIVNRFDYAQCKKLDMEQVLDQILRMPAERNRIIYMRPMQQID
SLALEKKLFSGPYPYHIAIIHEFSNPPNVRNKVRVRSWMDTIANISQELIKYEFFPEATR
TEEDVKKYPSYPWGRDIYTLEGVVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDEST
TIYAPRRKGQLSADICMETIGEEISERRQTRRGVFQRVVVVFIHYCDVRGEPVDDDYI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcccacggcgtaaggtcaccaggactcatagtttggggggaggaacttttagc
tctcttgggcatgaggaacccaaagactacatcaatgagctttcacatgaggtgctttgc
cacatattccgatacttacccatgcaggacataatgtgtatggagtgtctttcacggaaa
ctgcgggaagcggtgactctgtacttgcgggtggtgaaggtggtggacctttgtgccagc
cggtggtgggagtacatgccctcaggtttcacagactccagtttcctcatgctgatgaag
aagatgcctgacttggagcagctgtatggtcttcatccacgttacctagagagaaggcgg
gtcagaggttatgaggccttcagtattcctggtgttttggaggctctacaggcctgtccc
aaccttataggagttgagacatcccatttggagctggtggaggccgtatggaactacatg
cctcaggttcacattttagggaagtttaggaaccgaaacggggcctttcctattccttca
gagaacaaacttaccattccagctgctgctaaaatccagaccctccatcttgttggtgtc
aatgtgccagagatcccctgtctatccatgctcagacatctgtacctgaagtgggtgcgc
ctcactaagcctcagcccttcaaagactttctctgtgtgaacttgcgtacgtttgtcatg
aggaactgcgccggtcccaccaattctcttaagtatgtgcctcttgtcactggtctggcc
tccgcccgcaacttggagcagctggagctggtgagggtgcccttcttagggggactgatt
cagcatgtggtggaggatagctggaggtcaggagggtttcgtaatttgcacacaattgtt
tttggtgcctgtaaaaatgcacttgaggtggatctgggctacctcatcattactgctgct
cgcaggttgcatgaagttcgaatccagccttctttaaccaaagatggggtgttctctgca
ctgaagatggcagaactggagttcccccagtttgagactttgcaccttggatatgttgat
gaatttctattgcaatgtaacatgagccatgctgagttagtcaaatacggtcttgctgat
gtgattgaaaatccaggaatcatcacagacattggaatgaaggctgttaatgaagtgttc
acctccatcaagtatttggtcatttataactgtccacatctacacaacccacacaactgg
atcacagaccactcgcgctggagtcggttggtggacatcactctggtgcgctgtcatgct
atcaagctggagtcgttcagtcagttcattgaaatgcttcccagcctggaattcatctct
ctggatcagatgtttcgtgaacctcccaagggctgtgcccgtgtggggctcagtgcgggc
acgggtatcggggtatcatctgccctggtcagcaatcagaattctaacaatgataatgac
aacaataacaacaacaatcaccagaacaataatgatgcaaacattccaccaaataacaac
aaccaccagggtgaagatgtgcctcagcaaaaccaccgtggcccagaggagattcccaat
gtggagggcatggtggcagacaacatggagcctgagccggttcttgtggccgtcaatcaa
gaggaagagacccagggttcccgccagactactaatccttcgcttgaacaggatgaggaa
caagcaggtctgaagaaaccctgccctagcggagttcaaaccacagtgaagaagcagtcg
gtggtgctgtctgactcagacagtgaggacgagtacagtccaatcaggacgccagctgcc
gcccgctctcaaggccagtaccctgtgacagaagcccaggggaagagcagcacagctgtg
actccacatggtaaagggaaaactccgctgcgtagacgtggaccgcaccctcaagagttc
agctgtgagaaaggctgccaggtaaccagcgagcagatcaaggctgacatgaaggcggcc
actgagacggccagagacagaaacagtggaactgggcctgcttcaggccacgctgccggc
agctgtgtttgctccatccgctggagggaggactcggccaatcaggacgaccagggtgag
gcaggcagaggggacgatgatatggtaaggactcgctgcacgtgcagcaggtcgcgtccc
ggctctgaaaacaggactcatagtggccacagcctgccagcgggggacgagaaccacaga
ccagagcgtcacagcccagagcagagagcaggggaagatgagacggagaacaagcactcc
aacgctccacccaggacacacagctcatctgaagggcatagtgagaggactgcaagccac
cagcaaggctcgtcacacagaagccctacagacgagttccccaggagacccgtcactcgt
gcccgcagcagactttcctctgtgcccttggtttgtgagtcagaactgcctaaagcaaag
cctcgggctgcggtaaagagaaaacgtatggcagacaagtccaccagcaccagtgaccct
gtaactgaagacgaccatgtgcaggtgctcagccttaaatccaaaaacctggtgggaatc
acacttacaaactgtggcatcacagacctggtccttaaggagtgccccaaaatgatgttt
gtccatgcgacacgctgtagggtgctaaaacacttgattgtggaaagtgcccccatagtg
aaccgctttgactacgcacaatgtaagaagttggatatggagcaggtgcttgaccagatc
ttacggatgcctgcggagagaaaccgcatcatctacatgaggcctatgcagcagattgat
tctctggctctggagaaaaagctcttcagcggtccgtacccataccacattgctattatc
catgagttcagcaacccacccaatgttaggaacaaggtgcgcgtacgtagctggatggac
accattgccaacattagccaagaactcatcaagtatgaattctttccggaggccacacgg
acggaagaggatgtaaagaagtatcccagctatccctggggccgagacatctacacatta
gagggagtagtagatggagcgccatactcaatgatcacagatttcccgtggcttcgctct
ttacgcacggcagagcccaacagttatgctcgatacgactttgaggatgatgaaagcact
actatctatgcgccacggcgtaaggggcagctctcggccgacatctgcatggagacgatc
ggcgaggagatctcagagcgacggcagacacgcaggggtgttttccagcgtgtggtggtc
gtcttcatccactactgtgatgttcggggggaaccggtggatgacgactacatctag
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integrated database retrieval system
