Rhinichthys klamathensis goyatoka (western speckled dace): 130104057
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Entry
130104057 CDS
T09701
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04080
Neuroactive ligand-receptor interaction
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130104057
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130104057
04082 Neuroactive ligand signaling
130104057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130104057
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130104057
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130104057
NCBI-ProteinID:
XP_056126426
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All DBs
Position
Unknown
AA seq
1960 aa
AA seq
DB search
MFVAMVTVPTLSLLLALVEWAGQTSSSPHLLLRPRERERDPVASMHFNIAVIHAGSTVQQ
GEAGAAAAAGRVPYPGFGRVHSSFGESVVTQWGSANVIWLQVNDSSPRTLLSQLCDLLAA
RPLQGLVYEDERPLPLASGPLAPMLEFVSAQTGLPIVAVGGGAGLGRVPQETGSIFLQFS
SSTALQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSIVEGLTDGSFIGWEKKSIVMLNL
TDDPGGARARRLLKENEAQVRLLYCSQEEAEQVFQAAWAAGQASASHIWFAVGPALSELG
LTGLPNRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGPHFVTNCQTDGNR
TQRIRGRMKYFSNITLGGRDYSFNNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRY
PAWSRYGPFLQPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASALQE
GVAPMKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADM
AIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLT
VVAVTVFIFEFFSPVGYNRSLQSGKKAGGSTFTIGKSIWLLWALVFNNSVPVENPKGTTS
KIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPN
GSTEKNIRSNYPDMHQYMIKYNQRSVEDAISHLKSGKLDALIYDAAVLNYMARKDEGCKV
MTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEV
MSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMNKMGQSGKLDFLLAFSRG
MYSCCSFEDETAQGGVKVTVPGHHHTAMIPASSSHVVTSAVSNPAIAMVQQQQPQQPQPP
QSYKTPLPGSPPTIVHSGAALGPANTQLIGAPLPCTTFLPRPDRRLAVVDRWRLPKTASA
TTSMGVRGALAETGPLPQKVAPTWASGGGTGSGLDGYKRYYGPIDPEGLGTCLEQQTGSQ
TPKTVPRAHQQPPPTSVAFYQEKGMDHGMGKKVGVGTGGGGQGRGVKSLGTPRLPPKSQA
PALLTPNPPLQHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGREASRRPRPS
PPLPIPVPVTHSPSYTPPSPSPSLPYTSTSSSSSTTSSSTTSSATSSRSTSPSSTSTASS
RSTRDREGEEEDEEDLDELTEESSLLQGHNRTRDRERSILSPRSLTHGPPPPIPPRKPWG
TFGDREHKKDRERERGGSQLAQLQEWWAGWAERERDRERSSGAQGDTERKREKKRRKERD
KEKKKKRKKNKKRKKREERERERERERKRRKVKKKKKKAMKTKKKKKVSSGKRSEPEEGD
VEAERDGEGDGDREGEYSSFSTQYRSTFVDKGSLSAWEGERERGRRDGGEDEGDDREDES
GGGRGRERRPKSSHSQHQPSSKRYPNLNKLPSSVKFWVSGGEAGGTEASGPSPPSSLHTL
LSSSKRRRSSGVEREAEGRVGERKPLLLHYERGRVNTREGLSLHEWDSEDEEEEGEEEDR
ERERERERIEERVRRAGRGAVSESERDRIRAEESFSDEGSSGEFGRFERYWEGTGVGGAS
GIGGGGWFFGTYPAREKGGSVNSRDDSILGRAEGLGVAGDFWGSGPGIGWGSGGGSGGLG
SQWPPPPTSLPPPRRYWSVDKLQMKGEKRSRSGPKSKGQRSRDRMQDAASCTCTQYGHGR
PHIHHKHSSAQSHSQEDLLPHCHSFSGSSRPKAPPNPDKSKSGSQSNLSSQQAQLSEHIP
QASPSSPQPLLPSLSVPSAPNSLPMPIPPSSASMSPPPVLSPGAASGSSQAATASAKLQY
QRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgccatggtcacagtacccacgctttctctgctattggccctggtagaatgg
gcgggtcagactagctcctcccctcatctcttgctccggccccgagagcgtgaacgggac
ccggtggcatcaatgcacttcaacatcgcagtgatccacgcgggctcaaccgttcaacaa
ggggaagcaggggctgcagcagctgcaggtcgggtgccgtacccaggtttcgggcgtgtg
cacagcagctttggtgagagcgtcgtcacccagtggggatccgcaaacgtaatctggctt
caggtgaatgacagcagtcccaggacgctgctctctcagctgtgtgacctgctggcagcc
agaccccttcagggactagtgtatgaagatgagagaccccttccgctggcctccggcccc
ctggcccccatgctggagttcgtttcggcccagaccggcctccccatcgttgctgtggga
gggggagcgggtctgggcagggtaccacaggagaccggctcaatcttcctacagttcagc
tcttccaccgcactccaattggaggtgatctttgaggtgctggaggagtacgattggacg
gccttctcagtggtgtccacacgtcaccatggctaccaggacttcctgtcaatagtggaa
ggtttgaccgacgggtcattcatcggctgggagaagaagagcatagtgatgttgaattta
accgatgacccaggaggagcgcgagcacgacggctgttgaaagagaacgaagcacaggtg
cggttgttgtactgctctcaggaggaagcagaacaggtgttccaagctgcttgggcagct
ggtcaggccagtgcctcccacatatggttcgcggtgggtccagctctgtccgagctgggc
ctgaccggactacccaatcgcctttttgcagtcagaccgcagggttggagggacgagccc
cgcagacgtatcgcccgtggggtgtccatccttacccacggagctgttgcgttgcgcaag
gactacggagccactggaggtccacactttgtcactaactgccagacggatggcaacaga
acgcagaggattcgcggtagaatgaagtatttcagtaacatcactctcggtgggcgggac
tattcgttcaataacgagggctacctggccaatccctttctggatgtcatctcctacacg
cctgggagtggctgggaagacgtaggatggtgggagaatggggtgttacgtctgagatac
cctgcttggtctcgctatggccccttcctgcagccgcctgatgatgcccagcacctgagg
gttgtgaccctggaggagcgccccttcgttatcgtggagcttgcagaccctgcctctgga
acctgcattagggactctgtgccatgccgacggcctcttaatgccagtgcacttcaggaa
ggggtggcacctatgaaacagtgctgcaagggattctgcattgacattcttaagcgattg
gccagaattgttggcttcacctatgatctctacttggtgaccaatgggaaacatgggaaa
aagattgatggtgtttggaacgggatggtgggagaggttgtgtacaaacgggcagacatg
gcgatcggctccctcactatcaacgaggaaaggtcagaggtcgtggacttctctgtgccc
tttgtagagacgggaatcagcgtcatggtctctcgcagtaacggaactgtctctccctct
gcttttcttgagccgtacagccctgctgtgtgggtgatgatgtttgttatgtgcctgact
gtggtggcagtgacggttttcatctttgagttcttcagtccagtggggtacaaccgcagc
cttcagagtggcaagaaggccggaggttcaacgttcacaatagggaagtcaatctggctt
ctttgggcactggtctttaataactccgttccagtggagaaccccaaaggaactactagc
aagatcatggttcttgtctgggctttctttgctgtcatcttcctggctagctacactgcc
aacctggctgccttcatgatccaagaggaatacattgacactgtgtctggcctcagcgat
aaaaagtttcagcaccccacagagcagtacccccctctgaagtttggaacggtccctaac
ggaagcacagagaaaaacatccgtagtaactatccagacatgcaccagtacatgatcaaa
tacaaccagagaagtgtggaggacgccatctcccacctcaagtctggtaagctggatgcc
ttaatctatgatgcagccgtgttgaactacatggctcgtaaagatgaaggctgcaaagta
atgaccatcggctcagggaaagtattcgccacaactggttacggcatcgccctgatcaag
aactcccgctggaaacggccattggacctggccttactgcagctggtgggcgacgatgag
attgagatgctagagcgtctctggctctcagggatctgtcataatgataaaattgaagtg
atgagctccaaactagacatagacaacatggccggtgtgttctacatgctgctggtggcc
atgggcctaagtctgctggtcttcgcctgggaacacctggtttactggaggctgcggcac
tgcatgaacaaaatgggccagtccggcaaactggacttcctgctcgccttcagcagggga
atgtatagctgctgcagttttgaagatgaaactgcacaaggtggggttaaagtcacagtt
cctggccaccatcacactgccatgattcccgcttcttcctcacatgtggtcacttcagct
gtatccaatccagccattgccatggtgcagcagcagcaaccacaacagcctcaacctcct
cagtcttacaaaacacctcttcctggttcccctcccacaattgttcattctggagcagcc
ctgggtcctgcaaatactcaacttataggagctccgctcccatgcactactttcttaccc
cggccagatcgcagactggcggttgtggaccgctggagactacccaaaaccgctagtgcc
accacctccatgggtgtgagaggagccctagcagaaacagggcccttaccccaaaaggtg
gcacctacctgggcaagtggtggaggtacgggtagtggtctagatggatataagcgctac
tatggacctattgatccggagggacttgggacatgtctggaacaacagacaggttctcaa
actccaaaaactgtccccagagcccaccaacaacccccaccaactagtgtggctttctat
caggagaagggcatggaccatggcatggggaagaaggtgggagtgggtactggtggaggg
ggtcagggtagaggggttaaatctctgggaactccaaggcttcctcctaaaagccaagcc
ccagccctactgacacctaaccccccgctgcagcacccctctccccctctcccttcatcc
ttctggaggaagcggcgaccaaaaaagcccaaagaacctggtggcccactgtatgaaaac
atcctgccactgggccggagaggtggaggcagggaagcgagtcgaagaccgagaccctct
cctcctctccccatccctgtgccagtcacacattccccatcctacactcctccatcaccc
tctccctcactcccttacacctccacatcatcctcctcatccaccaccagctcctcaacc
acatcttcagccacatcctcacgttccacctctccttcatccacttccacagcatcatct
cgcagcacccgagatagagagggtgaggaagaggatgaggaggatttggatgagctgact
gaagagtctagtcttctgcagggccacaacagaaccagggacagagaacggtccatcctt
tcccctagatctctcactcatggacctcctcctcctatacccccacgtaaaccgtggggc
acctttggagacagggagcataagaaggacagagaaagagagaggggtggcagtcagcta
gcacagctccaggaatggtgggcaggctgggcagagagagagagggacagagagaggagt
agtggagcccagggagacacagaaaggaaaagagagaagaaacgtaggaaagagagagac
aaagagaaaaagaaaaagaggaagaaaaacaaaaaacggaaaaagagggaggagcgtgaa
agggaaagagaaagagaaaggaagcgtcgcaaggtgaaaaagaagaaaaagaaggcaatg
aaaacaaaaaagaagaagaaagtgtcttccggtaagcggtcagagccagaggagggtgat
gttgaggcagagagagatggagagggggatggggatagagaaggagagtactcatcgttt
tccactcaataccgcagcacatttgttgacaaaggcagtctttcagcttgggagggagag
agagaacgagggaggagagatggcggtgaggacgagggggacgatagagaggacgagagt
ggggggggtagaggaagggagagaagacccaaaagctcccattcacaacatcaaccatcc
agtaaacgctatcccaacctgaacaaactcccctcttcagtcaaattctgggtcagtgga
ggagaagcaggtggcactgaggcttccggaccctcccctccctcctctttacatacactc
ctctcctcatccaagagacggaggagtagtggggtagagagagaggcagaagggagagta
ggagagcggaagccactgcttctccactatgaaagggggcgagttaacacaagagaaggc
ctgtccctccatgagtgggactctgaggatgaggaggaggaaggggaagaagaagacaga
gaaagagaacgagagagggagagaatagaggagagagtgcggcgtgcagggagaggagca
gtgtctgagtcagagagggacagaataagagcagaggaaagcttttctgacgaggggtcc
tcgggagagtttggccgttttgagaggtactgggaaggaactggtgtaggtggagccagt
ggaattgggggtgggggctggttttttggaacataccctgctcgagagaaaggtggaagt
gtcaacagtagagatgactccattttgggtcgagctgaagggttgggtgtggcaggtgat
ttctggggttcaggtccagggattggatggggttctgggggaggcagtggagggctgggt
tcacagtggccaccccctcccacctcccttccaccaccgcgacgctattggtcagtggac
aaactacagatgaagggtgagaagcgtagccgcagtgggccaaaaagcaaaggtcagagg
tctcgggatagaatgcaagatgcagcatcatgtacgtgtacacagtatgggcacggtagg
ccccacatacaccacaaacacagcagtgctcagtcccatagtcaagaggatctgcttcct
cactgccacagcttcagtggaagctctcggcccaaagcaccccctaatcctgacaaatcc
aaatccggaagccagtccaacctaagctcccagcaagcccagctctcagaacacataccc
caggcatcaccctcctcacctcagccactcctgccctcattatctgttccttctgctccc
aactccctacccatgcccattcctccatcctctgcatccatgtcccctccacctgtgctt
tcccctggggctgcttccggctcctcccaggcagccaccgccagtgctaagcttcaatac
cagagacttcggtctgtgccccagccaagacgattctactccccgcacctgccactcaaa
gccaagagcttatgctcacgccgtggttctgcccatttctccagcctagagagtgaagta
tga
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