Rhinichthys klamathensis goyatoka (western speckled dace): 130104063
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Entry
130104063 CDS
T09701
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04218
Cellular senescence
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130104063 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130104063 (rbl1)
04218 Cellular senescence
130104063 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130104063 (rbl1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
130104063 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
130104063
NCBI-ProteinID:
XP_056126440
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MRGDETDSESVKSDDGPIRRNLEALCQELNMDEETAAEALQNFSSIWNTYTLEGDVVHWL
ACSLYVACRKSSIPTVGRGVMEGNCVSLTRILRSAKLSLIQFFSKMKKWSDMSNLSQDFR
SRIGRLERNFEVSTVIFRKFEPIFLDMFQDPQGEPPRLPRSRKHRRLPCHISDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFCNALMCSNRKDLINQHFRGLPKDTENLEE
MPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKKILKGDADTLTELLDTPHFQDNN
KAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKSTADPPSGQLSARMQVENNLQQHF
EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALVQIFNSC
SRNPTESILNRVKTMGEIFKQAYTKPTDDLPGAHMDFAENRLKLAEILYFKILENIMTLE
MKRLQGKDMAVLLEQEVLHCSLLACCLEVVLFAYSSQRTFPWILEILQIPPFYFYKVIEV
FIRSEEGLSRDMVKHLNSIEEQVLESKAWTRDSALWNALNKSNNKIPTVEEVNFSNSFDT
GNNAGGPTHLPLVALSPIIHPRIREVRTGLGSSARKDIPQSPLSLHDRYSSPAAGSAKRR
LFGDDAPPQSPVKRISVTPIKIIPNSMENNQNTTTTTTVLSMATINGQQLTIPLPMMKNE
MGGITVIQLQANEMNPLTGHVLLTSSPSRTVAPLASSDTQPLATSKPRRTGSLALFFRKV
YHLASVRLRDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAIYIISKIT
KEEHTFQDIMKCYRTQPQAHSHVYRSVLLKRRPREQQADENMEVDPPADQSANERMEQAD
SESEDRGDLIQFYNSVYVLKMKSFALKYAHSTLDNKMEAPPLSPFPSVRAQPLSPRRVSQ
RHSIFVSPHKNGSSLTPSAYTYKFTGSPSKELSDINQMIRQGGVSKKRAFTMDGDETESP
SKCLRQENDDVLLKRLQDVVSERASL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagatgaaactgattcggagtcggttaaatcggacgatggcccgatacggagg
aatctcgaggcgctttgtcaagagctcaatatggacgaggagacggcagccgaagcgctc
cagaacttcagctccatctggaacacgtacacgctagagggtgatgtcgtgcactggctg
gcctgttctctgtatgttgcctgtaggaagagctctatccctacagtgggacggggtgtg
atggagggcaactgcgtttcccttacgaggatcctgcgctcagccaagctcagtttgatc
cagttcttcagcaagatgaagaaatggtcggacatgtcgaacctctctcaggatttccgt
agccgtataggtcgactagagcgcaatttcgaagtgtcgacagtgattttccgaaaattt
gagccaatatttctggacatgtttcaggatcctcagggcgaacctcctcgcctgcctaga
agccgcaaacaccggcgtcttccatgccacatcagtgacgtcttcaagttctgttggact
ctctttgtgtatacaaaaggtaatttccgcatgattggagatgacctggtaaactcctat
cacctcctgctctgctgtctggacctggtgttttgcaacgctctcatgtgctccaacagg
aaagatctcatcaatcaacacttcagaggactgccaaaggacactgaaaacttggaggag
atgccctgtgtcattgacaagttgtgtgaactgcatgatggtttggtggtggaggccaaa
ggcataaaggagcactacttcaaaccctacataaagacactgtttgagaaaaagatatta
aaaggtgatgctgacactctgactgaattactggacaccccacatttccaagacaacaat
aaagccataaatcgtgagtatgaggaatatgttttgactgtgggggattttgacgagcga
gtgtttttgggggccgatgcagatgaggagatcggcacacctcgcaaatccaccgctgat
cctccttcaggtcaactatccgcccgcatgcaggtggagaacaaccttcagcagcacttt
gaaaagacacgatcccttgctccctctacacctctaacgggtcgacggtatttgaaggag
aaagaggtgctggtcacccccgtttcctcagccactcaaagtgtgagccgtctgcagagc
atggtgtccggcctacgaaacgcaccaagtgatgctctggtccaaatatttaattcttgc
tctcgaaatcccactgaatccattctgaaccgagtgaagaccatgggagagatatttaaa
caggcctacaccaaacccacagatgacctgccaggagcacatatggattttgcagagaat
cgtctgaagctggcagagatcttgtacttcaagatcctggagaatatcatgactctggag
atgaagagattacagggcaaagatatggcggtcctgttagagcaggaggtgctccattgc
tctctgttggcgtgctgtctggaggtggtgctgtttgcgtacagctctcaaagaaccttc
ccatggatactggaaatcttacagatcccacctttctacttttacaaggtgattgaggtg
ttcatccgctctgaggaggggttgtcccgagacatggtgaagcatttgaacagtatcgag
gagcaggtgctggaaagcaaagcctggactagagactcggccctgtggaacgcgcttaac
aaatctaacaataaaatccctactgtggaagaggtaaatttttccaatagttttgacacg
ggcaacaatgcaggcggtcccactcacctgccgttggtagcgctatcccccatcatccac
cctcgcatcagggaggtccgcacaggcctgggctccagcgcacgcaaagacatccctcaa
tctcccctctctctccacgatcgctacagctctccagcggctggcagcgctaagaggcgc
ttgtttggtgacgacgctccaccacagtccccagtgaaaagaatctcagtcactcccatc
aaaatcatccccaactccatggaaaacaaccagaacaccaccaccacaacgactgtcctc
tccatggcaaccataaacggccagcagctcactattccactgccgatgatgaaaaacgag
atgggcggcatcacagtcatccaacttcaggccaatgagatgaaccctctcacgggccat
gtcttactgacctcctcccccagccgaaccgtagctccactcgccagctccgacacacag
cctctggcaaccagcaaaccccgccgcactggatccctcgcgctattcttcaggaaggtg
tatcatttagccagcgtgcgtctgcgagacctgtgtctgaagctggatatctcctcagag
ctgcgagggaagatctggacgtgtttcgagcattctctgctgcactgcactgacctgatg
aaggacagacacctggaccagctgctgctctgtgccatctacattatatccaagataaca
aaagaagagcacacttttcaggacattatgaaatgctaccgaacccaacctcaggcccac
agtcacgtgtaccgcagtgttttactgaagaggcgtcccagagagcagcaggcagatgag
aacatggaagtggatccaccagcagaccagtcagccaatgagaggatggaacaggctgac
agcgaatcagaggatagaggagacctcatccagttctataactctgtttatgtgttaaag
atgaaatcattcgctctcaaatatgcacattccacgcttgataacaagatggaggctcct
ccattatctccattcccatcggttcgggctcagcctctctctcctcgccgtgtgtctcag
agacactccatctttgtctctcctcataaaaacggctcgagtctcacccccagtgcctac
acgtacaagttcactggcagcccatcaaaggagctgagtgacataaaccagatgatccgt
cagggtggggtgagcaagaagcgggcgttcactatggatggcgacgagaccgagtctcca
tctaaatgcctccggcaggagaacgacgacgtgctgctcaaacgcctgcaggatgtggtc
agtgagagagcgagtctctga
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integrated database retrieval system
