Rhinichthys klamathensis goyatoka (western speckled dace): 130104108
Help
Entry
130104108 CDS
T09701
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04540
Gap junction
rkg04814
Motor proteins
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130104108 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
130104108 (tubb1)
09142 Cell motility
04814 Motor proteins
130104108 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130104108 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130104108 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130104108 (tubb1)
04147 Exosome [BR:
rkg04147
]
130104108 (tubb1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130104108 (tubb1)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130104108 (tubb1)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130104108 (tubb1)
Exosomal proteins of colorectal cancer cells
130104108 (tubb1)
Exosomal proteins of bladder cancer cells
130104108 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
130104108
NCBI-ProteinID:
XP_056126500
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINRTGTYEGDMDLQLQRINVYFNEAHGGKYV
PRALLVDLEPGTMDSVRSSHIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRV
RNEAESCDCLQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSIMPSPKVSDTVV
EPYNATLSVHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYSALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVVVCDIPPRG
LKMASTFIGNNTAIQEIFKRIGEQFSVMFRRKAFLHWYTGEGMDELEFTEAESNMNDLVS
EYQQYQDATADMDYDAEDEVTEEEGLPSIVHSTRVEVKTESVAETSDGE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattgttcatctacagatcggacagtgtgggaatcagatcggctctaagttc
tgggaggtgatcagtgaagaacatggtattaacagaacaggaacatatgagggcgacatg
gaccttcagctgcagaggatcaatgtgtacttcaatgaagcacacggtggcaaatatgtt
ccaagagcattgttagtggacctggagccaggcactatggacagcgtgaggagcagccac
ataggacagctcttcagaccggataattttatacacggaaattctggagctggcaataac
tgggccaaaggtcactatactgagggcgcagaacttgtggagcaggttgtggatcgtgtc
cgtaatgaagcggagagctgcgactgcttgcaggggttccagttcgtccactctctaggt
ggtggcaccggttcgggaatgggtaccttgattatcaataagatccgagaggagtaccct
gaccgcatcatgaatagtttcagcataatgccctcgccgaaggtctccgatactgtagtg
gagccgtataacgcgaccctatcagttcaccagctgattgagaatacagatgagacgttt
tgtattgataacgaagcgctgtatgatatctgcttccgcactctcaagctcacaacgcca
acttatggagatctcaaccacctcgtatccctcaccatgagtggggtcaccacctccctc
cgcttcccaggtcaactgaacgctgaccttcggaagttggccgtcaatatggtgcccttc
ccgcgtctccatttcttcatgcctggtttcgctcctctcacagcacgtggtagccaacaa
tacagtgccctaacggtgcccgagctcacccagcagatgttcgacgcccgtaacatgatg
accgcgtgcgacccgcgtcgaggacgctatctgacagtggcgggcattttccgtggtcgc
atgtccactaaggaggttgatgagcagatgctcgccattcagcagaagaacagcaattac
tttgtggattggatccctcacaacgtcaaagtcgttgtttgtgatatcccgccacgaggc
ctcaaaatggcctccacattcatcggaaacaacaccgccatccaggagatattcaagcgc
ataggggagcagttctcggtcatgttccgacgcaaggccttcctgcattggtacacgggg
gagggcatggatgagctggagttcacagaggcggagagcaacatgaatgatctggtttca
gaataccagcaatatcaggatgccacagccgatatggattacgacgcagaagatgaagtg
acagaagaggagggtctgccatcaatagtacacagcactcgagtagaggttaagacggag
tcggtcgctgaaacttctgacggcgaatga
DBGET
integrated database retrieval system
