Rhinichthys klamathensis goyatoka (western speckled dace): 130104133
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Entry
130104133 CDS
T09701
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04060
Cytokine-cytokine receptor interaction
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130104133 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130104133 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rkg04052
]
130104133 (gdf5)
Cytokines and neuropeptides [BR:
rkg04052
]
Cytokines
Transforming growth factors (RSTK binding)
130104133 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
130104133
NCBI-ProteinID:
XP_056126533
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MKVLTSLPLLLGFWTLLYLVFIPQALSLAGVAGHRGTGAVIPNPRLPVARNGTTLVKPSD
NAKISRIRAGPPLIKSETIPARASVPVSLGRREAARSLVPKDAARVSSSSSIQHQTGHNK
GVSKTPAAIRAGQLNPGVMKSIAPAPAHLRAKGAVKLEDSEEPKHPLVTPHDYMLSLYWS
LTSGEVNTSVLHEAGMANTITSFVDRGQDERAPLLRRQRYLFNISSMEKEGLLGAELRIL
RKKHMDSRKAAFEGMVALRLYTCASGKHRGLLVHSLRIDPHSAPYWEVFDIWKRFKDFRN
APQLCFELEAVDQGRPLDLRLLGLGRAGRQTKEKAFFVVFGRTKKRGLFYNEIKARSGHD
NKTVYEYLFTQRRMRRAPLPRGKKPPKNQTKQRCNRKQLHVNFKEMGWDDWIIAPLEYEA
FHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDSANNVV
YKQYEDMVVESCGCR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgactagtctccctcttttactgggcttctggactctgttatacctggtc
ttcatcccgcaagcgctctccctcgccggcgtggccggtcacaggggcacgggagcggtc
atacccaatccgcggttaccggtggcgcgcaacgggacgacgctcgttaagccctctgac
aacgcgaagatctctcgcatccgggctggtccacctctgataaagtccgagactatcccg
gctcgcgcctcggtacctgtgagtttagggcgcagggaggccgcgcgctctttggtaccc
aaggatgcggcgagagtctcatcctcttccagcatccagcaccaaacgggacacaataaa
ggagtttctaaaacgccagctgcaatcagggccggtcagctcaatcctggcgtgatgaaa
agcatcgcaccagcacctgcccatctgagagcgaaaggcgcagttaaactggaggacagt
gaggaacccaaacaccctttagtgacgccccatgactacatgctgtccctgtactggtca
ctgaccagcggcgaggtcaatactagtgtcttgcacgaggctgggatggccaataccatc
accagctttgtagatagaggacaagacgagcgagcgcccctgctgagacgccagcgctac
ctcttcaacatcagctcgatggagaaggagggtctgttgggcgcagagctgcgcatcctc
cgaaagaaacacatggactctcgtaaggccgcgtttgagggcatggtagctctgagactg
tacacctgcgcgtcaggtaagcacagaggtctactggtgcacagtcttcgcatcgaccct
cacagcgccccttactgggaagtgtttgacatctggaaacggttcaaagacttcagaaac
gctcctcagctttgctttgagctggaagccgtagatcaaggacgaccgcttgacttgcga
ttactcggcctgggccgagcgggaaggcagaccaaggagaaagccttctttgtggtgttc
gggcgtacaaaaaagcgagggctcttttacaacgagatcaaagcccgttcaggtcacgac
aacaagacggtgtacgagtacctcttcacccagcgacggatgcgtcgggcaccgttgcct
cgtgggaaaaagccacccaagaaccaaaccaaacagcgctgcaaccgcaagcagttgcac
gtcaactttaaggaaatgggctgggacgactggatcatcgctccactggagtacgaggcc
ttccactgcgacggtgtctgcgactttcccatacgctcccatttggagcctaccaatcac
gccatcatccagactctcatgaactccatggatcccaggtccacgccaccgacctgctgc
gtccccaccagactcagccccatcagcattctgtacatcgattccgccaataatgtggtg
tacaagcagtacgaggacatggtggtggagagctgtggttgcaggtag
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