Rhinichthys klamathensis goyatoka (western speckled dace): 130104234
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Entry
130104234 CDS
T09701
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130104234 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rkg01001
]
130104234 (limk1a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130104234 (limk1a)
Protein kinases [BR:
rkg01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
130104234 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
PDZ_2
RIO1
Haspin_kinase
PDZ_4
Motif
Other DBs
NCBI-GeneID:
130104234
NCBI-ProteinID:
XP_056126696
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MGSQRLPRKRECVHHSTGNEQTSPETSASVSDMSGPPEARQAVRALPGQMISCRNRRYRR
VKGRKCCECGASLSHWYYEKDGRLFCKKDYWAKFGELCHGCSEPIATGLIMVAGEQKYHP
ECFTCLNCRAFIGDGDTYALVERSKLYCGQCYYRTVVTPVTLPDSPCSRIPHTVTLVSIP
ASTDGKRGLSVSIDQGPSPNGYSPELKPTIRVSQVDPECISPDVKNSIHVGDRILEINGT
PIQNVPLDEIDLLIQETSRLLQLTIEHDPHDHGSSEDRVDGPTPLSEGPSPIMPITRPPS
QDINNLRSRIITRSCSIDKSPSSSSSPSPLSLRKDIGRSESLRVVTNRTHRIFRASDLIH
GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQMTFLKEVKVMRCLDHPNVLKFIG
VLYKDKRLNFIAEYIKGGTLRDIIKNMDSSYPWNQRVSFAKDIASGMAYLHSMNIIHRDL
NSHNCLVRENNSVVVADFGLSRLMVEDKIQDKLVSGQLPGVKKADRRKRYTVVGNPYWMA
PEMIHGKSYDEKVDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVKGFLDEYCPPDCPA
SFFPMAVLCCDLDAEKRPAFVKLESWLENLKMHLEMGLHLVSELELIHQDFRQKHSSGKN
GLHTHPEQPE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggggtcacagcggctcccgaggaagcgcgagtgtgtgcatcacagcacaggaaatgag
cagacctcgccagagacgagcgcttctgtgtcagacatgagcggtcctcctgaagcccgt
caggcggtgcgagcgctcccaggacagatgatctcctgcaggaaccggcgctaccggcgc
gtgaaaggcagaaagtgttgtgagtgcggggcgtctctctcacactggtactatgagaag
gacggccgtctcttctgtaagaaggactactgggccaaatttggggagttgtgtcatggc
tgttcagagcccatcgccaccggactcatcatggtggccggagagcagaagtatcaccca
gaatgcttcacctgtctaaactgccgagcgttcatcggtgatggagacacgtatgcgctg
gtggagcgctccaaactttactgtggacagtgttattaccgcaccgtcgtgactccggtc
accctgcccgactcgccctgctccaggattccccacacggtcacgctcgtgtctattccc
gcctccaccgatgggaagcgcgggctctccgtgtccatcgatcagggccccagtcccaac
ggatacagccccgaactcaagcccaccatcagagtctcgcaggtggacccagagtgcatc
agtccagatgtaaagaactccattcatgtcggcgatcggatcctggagatcaacgggacg
ccgattcagaacgttcctctggacgagattgatctgctgatccaggagaccagtcgtctg
ctgcagttgaccattgagcacgaccctcatgatcacggctcctcagaggaccgggtggac
ggccccacacccctgtctgagggccccagtcccatcatgcccatcacacgcccgcccagc
caggacatcaacaacctgcgctcgcgcatcatcacgcgcagctgcagtattgataaatcc
ccgagctccagtagctcaccgtctcctctgtctctgcggaaggacatcggccgctccgag
tcgctgcgcgtcgtcaccaaccgcacacaccgcatattcagagcctccgatctcatccac
ggagaggtcctgggcaagggctgcttcgggcaggccatcaaggtgactcacagagagacg
ggcgaggtgatggtgatgaaggaactcatccgcttcgatgaggagacacagatgaccttc
ctcaaagaggtgaaggtgatgaggtgtttggaccatcccaacgtgctgaagttcatcggc
gtcctttataaagacaaacggctcaacttcatcgcggagtacatcaaaggaggaacactg
agagacatcatcaagaacatggacagtagctatccatggaatcagagagtgagtttcgcc
aaggacatcgcctctgggatggcttacctgcactccatgaacatcatccaccgagatctc
aactcacacaactgtctggtccgagagaataacagtgttgttgtggcggacttcggcctg
tcccggctcatggtggaggacaagatccaggacaaactggtgtccggacagctcccgggc
gtcaagaaggccgacaggagaaagagatacactgtggtgggaaacccgtactggatggcc
ccggagatgatccacggaaagagctatgatgagaaggtggacatcttctccttcggcatc
atgctgtgcgagattatagggcgagtgaacgccgatcccgactacctgccccgggccatg
gatttcgggctgaacgtcaaaggctttttggacgagtactgcccgccggactgtccggcc
tctttcttccccatggcggtgctctgctgcgatctggacgcagagaagcggcctgcgttt
gtgaagctggagtcgtggctggagaacctgaagatgcatctggagatgggcctgcacctg
gtctccgagctcgagctcatccatcaagacttccggcagaaacactcgagcgggaagaac
gggctgcacacacacccggagcagcccgagtga
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